Tigriopus californicus (tidepool copepod): 131888364
Help
Entry
131888364 CDS
T09700
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 alpha-like isoform X1
KO
K09054
cyclic AMP-dependent transcription factor ATF-6 alpha
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131888364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131888364
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
131888364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
Rab11-FIP3
ZapB
CC_Bre1
CENP-H
YabA
bZIP_Maf
Fungal_TACC
Seadorna_VP6
DUF6262
GAS
Tho2
Motif
Other DBs
NCBI-GeneID:
131888364
NCBI-ProteinID:
XP_059093188
LinkDB
All DBs
Position
10:complement(6808181..6814667)
Genome browser
AA seq
762 aa
AA seq
DB search
MRDFLDPTQLSSDDSVNYANETMTESEDLLSQISNDLGLPDFMENHLFSNDLLHTPSLGE
DVHNPDISLFSELMQDDMSLTDSSSLKSEPLSPSSPSSSSCSSTNHHHMPPSPSNSDHSE
KDLSMKVFTTRTSDTPRIVGQYSPLKTNSNANFILSPPHSPPENCISTTTPNWQPMIQVV
STSGNFVSNHNQAPTIMTMTGLTNVKLPIPKVQRPVAAQTPNVTKSPVVLTSSQFTQLTE
TGVIHLSGNSSNPGLRNSTDGTPIFIKTEPILSTNTPIVTASCNFSPSQSLTLTLPTTTP
NPTSQSHHNDVELKALKRQQRMIKNRESACMSRKKKKEYVTNLEDQLKLLAHENRDLKTE
NEQLRSKLRELESEKTIWMDTVLTSPNLKKGTALFALLFMVSLNVSSLSGLYSQSTSPLS
PMPNPELPVLKSNAGLKQNLAAVGGRSLLWAQEDLSEDNITKASPICPMFINQTESLRLD
NQLRGWFTEDPTNDAKKPAAEQHHSGTFGEILPSKEQAPQNAETSLGHVQPVASGLSGRV
YHMMLTEEAKVSQRPTPTSSNVMTPRGKAEITIYDSDTPRFSYESFFEAIDRRSDTFYVV
SFSGDHLLLPATSHNQTNRPRMSLLLPTVAVPMNESMQPPLNHVAMMQIDCEVMNTKLLH
IREDAVPVHMSAHLKNASIQRNGSLDAEEDDDAHAFNVDQEIHSNASLHHIDDQFEANNA
LTEDDYKLRPLRKKRGAKSGKSSSSSGHQTPLYRRKRAGGFR
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgagggacttcctggaccccactcaactctcttcggacgattcggtgaattacgctaac
gagaccatgacggagagtgaggaccttttgagccaaatctccaatgacttggggctaccc
gatttcatggagaaccacttattttccaatgatcttcttcacactcctagcctcggcgag
gatgttcataatccagatatctcgctcttcagtgaactcatgcaggatgacatgagcctt
actgactcttcaagcctgaagagtgagcctctctcgccttcctcgccttcatcttcatcc
tgctcatccacaaatcatcatcacatgcctccgtctccttcaaattcggatcattccgag
aaagatttgtctatgaaagtgttcacaactcgaaccagcgatacgcccagaattgtggga
caatacagccctctcaagactaattccaacgccaatttcatcctttcgccgccacattca
ccgccagagaattgcatcagtaccaccacacccaattggcagcccatgatacaagttgtc
agtacttctgggaactttgtctcaaatcataaccaggctccaacaatcatgaccatgacg
gggttgaccaatgttaaattacccattccaaaagttcaaaggccagtagcagcccaaacg
cccaatgtgaccaagtcccctgtggtattgaccagttctcagttcacgcaattaacggaa
acaggagtgattcacttgagtggcaattcgtccaacccgggattgcgaaattccactgat
ggcacgcccatcttcatcaagacggagcctattctaagcacaaacacacccattgtgacg
gcctcctgcaatttctctccatcccaatctttgaccttgaccttgccgaccacaactcca
aatccaacgtcccagtcccatcataatgacgttgagctcaaggcgttgaaaaggcaacag
cgtatgatcaaaaatcgagagtccgcatgtatgtcgaggaagaagaagaaggaatatgtc
actaacctggaggatcaactgaagctactcgcgcatgaaaaccgagatctcaagaccgag
aacgagcaactccgatccaagctcagggagttggagtctgagaaaaccatttggatggac
acggttctcaccagtcccaatctaaagaagggcaccgccttgttcgcccttctcttcatg
gtgtcactcaatgtgtcttctctcagtggcctttattcgcaatcaacttctcccttgtca
cccatgccaaaccctgaactgccagttctaaaatccaatgccggactcaagcaaaacttg
gccgctgttgggggccgatctttactctgggctcaagaggatctcagtgaagacaacatc
acgaaagcttctccaatttgccccatgttcatcaaccagacagaatcgttacgtttggac
aaccagcttcgtggttggttcacggaagatccaaccaatgatgcgaagaaacctgcagca
gagcaacatcattctggcactttcggagaaatcctgccgtccaaagaacaagcacctcaa
aacgctgaaacctccctaggtcacgttcaacccgtcgcttcgggtctgagcgggcgggtt
tatcacatgatgctaacagaagaggccaaagtttcacaacgaccaactccaactagttcc
aatgtcatgaccccacgtggcaaagctgaaataaccatctacgattcagataccccaagg
ttcagctacgaatcgttttttgaagccattgaccgtcgttcagacacgttttatgttgtc
tccttctccggtgaccatcttctgcttcctgcaacctctcataatcagaccaataggcct
cgaatgtcgcttctcttgcctacggtggctgtgcctatgaatgaatcgatgcaaccgcct
ttgaatcatgtggcaatgatgcagatcgattgcgaggttatgaatacgaagttacttcat
attcgagaggatgctgttcccgttcatatgtcagctcacttaaagaatgcatccattcaa
cgcaatggttcgttagacgctgaagaggacgacgacgctcatgcatttaatgtcgaccaa
gagatccacagcaacgcatcccttcatcacatagatgaccaatttgaagccaataacgcc
ttgactgaggatgattacaaattgcgacctcttcgcaagaagcgtggtgctaaatctgga
aagtcgtcgagttcaagtggtcatcaaacgccactctatcgacgtaaaagagcggggggc
ttccgataa
DBGET
integrated database retrieval system
