Tigriopus californicus (tidepool copepod): 131888482
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Entry
131888482 CDS
T09700
Name
(RefSeq) sodium-dependent proline transporter-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
131888482
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131888482
Transporters [BR:
tcf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
131888482
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Gene cluster
GFIT
Motif
Pfam:
SNF
Crisp
Syndecan
FAM176
Motif
Other DBs
NCBI-GeneID:
131888482
NCBI-ProteinID:
XP_059093331
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Position
10:2211323..2221929
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AA seq
874 aa
AA seq
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MSDHDSGRLPWTAGGRDRRPSNDTRRTPLSDEDSSDEDHEKQSRRSSNHSPRSRHSDRRR
QSEISIVLERSRKQSRQSALSEIRQEAKDEASSIPSEHLSNFDRYRKHSDLDDLGIVDVH
DRSFQGTEEGSKKSDAENDDDPPSRDRSTERNPHERGKWSGKLDFFLSCLGYAVGLGNIW
RFPYLCYKFGGGAFLIPYLIMLFFIGIPCFFMELALGQYSAMGPITIYANIAPIFAGLGF
ANFFASAVVAIYYNMLLAWTIYYMIASFTTGTLPWETCDSSFNTNFCFSVNDYKNCTEYR
KQTETSSSGPEEIIYHRGRCITDGSIISEIENNITYFYGCQRPVEVLESDGPNCRRVIAT
NYEPGVYINPNDCVELSRRNEFTKAFDLPHGIRNTAAQEYYTHEVLNESSGIDEWGVPQW
KLVLCLLGAWVVIFLCLINGVHSSGKVVYFTATFPYIILVILFFRAVLLPGAWEGVKFYI
IPEWKRLKDIRVWEAAAIQIFFSLGVGSGGLITMASYNNFDKNIFRDTLIISLCNCATSI
FAGFAIFSVLGFLATELGVAVKDVVKSGTGLAFVAYPDLVTRLPAAPVWAVLFFAMLFTL
GLDSQFTFVETLATGILDLKPSWRKRKWIVVLLISILGFLIGLPLTTRAGGYLLDLLDYY
GAGWAFLFIALMELIIVSYIYGLRRFYRDLEEMFDFRPSYWLQGHMTVIFTTVSPLIILF
ILVYSWVEHNPLTRDDYEYPEWANIVGWVIGLIPIVAVPLIGIIVVGYRFCKRDRHYALK
KKFGKLFHYTSKWRDNEEDADDSDSEDDKNSDRDEEKAQQRLARRAERKKRFRGRSTRRV
RAHSGQRGARNFLRQSRKKTKSSEDGDSRPPWRF
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatcatgattcaggacgattgccttggaccgcaggtgggcgggacagaagacct
tctaatgacacccgaaggacgcctctaagcgatgaggattccagtgatgaggaccatgag
aagcaatcccgacgatcttcgaaccactcgccaagatcgcgtcactcagaccgacgaagg
caatcggaaatttcgattgtcttggaacgttccagaaaacaatccaggcaatctgcatta
tcggagattcgacaagaagccaaagatgaggcgagctcaattccctcagagcacttgagc
aactttgatcgctatcggaagcactcagatctcgatgatctaggaatagtggatgtccat
gatcgtagtttccaaggaacggaggagggttccaagaaatctgatgcggaaaatgacgac
gatcctccatcaagagatcgttcaacggaacggaatcctcatgaacgcgggaaatggtct
ggcaagctggatttcttcctatcctgtttgggttacgcagttggtttgggaaatatttgg
agatttccgtacttgtgctacaaatttggcggtggcgctttcctgattccttatctgatc
atgttgttcttcattgggatcccttgtttcttcatggagttggcattgggccaatactcg
gctatgggaccaataaccatctatgcgaacattgctcccatttttgccggacttggattt
gccaacttttttgccagcgctgtggtcgccatttattataacatgctcttggcatggacc
atatattacatgatcgcttcatttacgaccggaacgctcccttgggagacctgcgacagc
agcttcaatacgaacttttgtttcagtgtcaacgactacaagaactgcacggaatatcgc
aaacaaacagaaacgtcgtcaagtggtccagaagagattatttatcatcgaggtcgatgt
atcacggatggatctatcatcagtgagatcgagaataatatcacctacttttatggctgc
cagagaccagtggaagtgctggagtccgatggacccaattgtcgaagggtcattgccacc
aactacgaaccaggggtttacatcaacccgaacgattgcgtggaactaagccgacgaaac
gagttcacgaaggcttttgacctgccccatgggatcaggaacacagctgcccaggagtat
tatacacacgaagtcctcaacgaatccagcgggattgacgaatggggtgtgcctcaatgg
aagttagtgctctgtttactgggagcttgggtggtgatcttcctctgtctgatcaacgga
gtccacagctcgggaaaagtggtatatttcactgccacttttccctacattatcctggtg
atcctgttcttcagggccgtcctccttcctggagcttgggaaggggtcaagttctacatc
atcccagaatggaaacgcctcaaggacattcgagtttgggaggctgccgccattcagatc
ttcttctctttgggcgttgggagtggcggtctgatcacaatggcctcttacaacaacttt
gacaagaacattttccgcgataccttgattatttctttgtgcaattgcgcaacatccatt
tttgccggatttgcgattttctccgtcctgggatttcttgccactgaacttggagtggca
gtgaaggatgtggtcaaaagcggaactggtttggcctttgttgcttatccagatttggtc
acaaggttacctgcggcccctgtttgggcagtgttgtttttcgccatgctgtttaccttg
ggtctggattctcaattcacgtttgttgagaccttggctacggggattttggatttaaag
ccttcgtggcggaagcgaaaatggattgtggttttgttgatttcgattttaggctttctg
attggtttgccccttactacgcgggctggtggatatttacttgatttattggactattac
ggagcaggctgggcttttctgttcattgccctcatggaattgatcatcgtgtcctacatt
tatggtcttcgtcgtttctatcgtgatctcgaagaaatgttcgacttcagaccgagttac
tggcttcaaggacacatgaccgtcatctttacgactgtttcacctctgattattctgttc
attttggtctattcttgggtggaacataaccctttgactcgggatgattatgagtatccg
gaatgggccaatattgttgggtgggtcatcggattgatcccaattgtggctgtgccctta
atcggaatcattgtcgtgggttacaggttctgtaaaagagatcgacactacgccctgaag
aagaaatttggcaagttatttcactacacgtccaaatggagagataatgaggaagatgcg
gacgattcggacagcgaggatgataaaaactccgacagagatgaagaaaaagcccaacaa
cggttagcccggcgagcggagaggaaaaaacgcttccgcggacgaagtactcgtcgtgtc
cgagctcactcaggtcagcgtggagcccgcaactttttgaggcaatcaaggaagaagacc
aagtcgtccgaggatggcgattccaggcctccatggagattttaa
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