Tigriopus californicus (tidepool copepod): 131888496
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Entry
131888496 CDS
T09700
Name
(RefSeq) katanin p60 ATPase-containing subunit A-like 1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tcf04812
]
131888496
Enzymes [BR:
tcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
131888496
Cytoskeleton proteins [BR:
tcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
131888496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
TIP49
AAA_5
AAA_33
Mg_chelatase
AAA_22
AAA_16
AAA_14
IstB_IS21
NPHP3_N
AAA_28
AAA_7
TsaE
AAA_18
AAA_17
AAA_2
nSTAND3
RNA_helicase
NACHT
Parvo_NS1
ORC-CDC6-like
AAA_24
PhoH
AAA_30
Guanylate_kin
Motif
Other DBs
NCBI-GeneID:
131888496
NCBI-ProteinID:
XP_059093348
LinkDB
All DBs
Position
10:7365876..7368182
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AA seq
528 aa
AA seq
DB search
MAISVSDICENTKLAREMSLIGNYETASVYYQGVIQQIHRLLSGLDDPGRKYKWQQIQGE
IAQEYDVVKGITHTLALFKGESHDTRQVGGAGRSAFASFEEPTRDPDVWPAPPPKDPDVW
SNPTPADNQARGSSVRPVRGSKKNERNAKGGHKPVANTGKRTRGGAPDTRGAKGPGKGGE
AAAKKPGRGPTSSRGSTSQDDKGQDKDKPDEAEEEDPEERKFDATGIDGDLIEMLERDIV
QQNPNTKWDDIADLHEAKRLLEEAVVLPMWMPDFFKGIRRPWRGVLMVGPPGTGKTMLAK
AVATECGTTFFNVSSSTLTSKYRGESEKLVRILFEMARFYAPSTIFIDEIDSLCSRRGSE
SEHEASRRVKSELLVQMDGMCSITEAGKVVMVLAATNFPWDIDEALRRRLEKRIYIPLPT
EEGREALLKINLREVKLAEDVGLKAIARKLGGYSGADITNVCRDASMMSMRRKIAGLKPS
EIRNLNQEELDLPVTKTDFMEAIAKCNKSVSKEDLDKYEKWMDEFGSS
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggccatttcggtgtcggatatttgcgaaaataccaagttggctcgggagatgtcgttg
atcggcaattatgagacggccagtgtgtattaccaaggcgtgattcaacaaatccaccgc
ctcttatccggattggatgaccccggacgcaaatacaagtggcagcaaatccaaggcgaa
atcgcccaagaatatgacgtggtcaagggaatcacgcacaccttggctctcttcaagggc
gagagtcacgatacacggcaagtgggcggggcggggcgctccgctttcgcctcctttgaa
gaacccacccgcgatcccgatgtttggcccgcacctccgcccaaggatccggatgtatgg
tcgaatcccactccagccgataaccaagcccgtggcagctccgtgcggcccgtgcgaggc
tccaagaagaacgagcgtaatgctaaaggcgggcacaaacccgtggctaacacgggcaaa
cgaacgcgtggcggggcacctgatacgcgaggtgccaaaggtccgggcaaaggtggcgag
gctgcagctaagaagcccggacgaggtcccacttcatcgcgagggtccaccagtcaagat
gataaaggtcaggataaggacaagccggacgaggccgaggaggaagacccggaagagcgc
aaattcgacgccacgggcatcgatggcgatttgatcgagatgttggaacgcgatatcgtt
caacagaacccgaataccaaatgggacgatattgccgacctccacgaggccaagcgattg
ttggaggaggccgtcgtgttacccatgtggatgccggattttttcaaagggatccgacgg
ccttggcgaggggtgttgatggtgggacccccgggtacgggtaaaaccatgctggccaag
gccgtggccactgaatgtggtacgacgttcttcaacgtatcatcttccaccctcacctcc
aagtatcgaggggagtccgagaaactggtccggattctgttcgaaatggcgcgtttctac
gccccgagcacgatctttatcgatgaaatcgactcgttgtgttcgcgcagaggctcggaa
tccgaacatgaggcctccaggagagtgaaatccgaattactcgtccaaatggacggaatg
tgtagtattaccgaggccggaaaagtggtcatggtcctcgccgccaccaatttcccttgg
gacattgatgaggcgctgagacggcgcttggaaaagcgtatttacattcccttacccaca
gaggaaggtcgcgaagcgcttctcaaaatcaacttgcgagaggtcaagttggccgaagat
gtgggcttgaaagcgattgcccggaaattgggtggatattccggcgcggatatcaccaat
gtgtgtcgagatgccagtatgatgtccatgagacgcaagattgccggcttgaagccttcc
gagattcgcaacctgaatcaagaagaacttgacttgcccgtcaccaaaacggatttcatg
gaagccattgctaaatgcaacaagagcgtctccaaggaggatctggacaagtacgagaag
tggatggacgaatttggatcgtcctaa
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