Tigriopus californicus (tidepool copepod): 131888501
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Entry
131888501 CDS
T09700
Name
(RefSeq) GA-binding protein subunit beta-2-like
KO
K09454
GA-binding protein transcription factor, beta
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131888501
03029 Mitochondrial biogenesis [BR:
tcf03029
]
131888501
Transcription factors [BR:
tcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
131888501
Mitochondrial biogenesis [BR:
tcf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
131888501
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Ank_KRIT1
DNA_Packaging_2
HIP1_clath_bdg
ANK_LRRK2
Tup_N
Selenoprotein_S
KfrA_N
Motif
Other DBs
NCBI-GeneID:
131888501
NCBI-ProteinID:
XP_059093361
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All DBs
Position
1:6113895..6116138
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AA seq
550 aa
AA seq
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MANSGILIGMDDTGSGPITVQTTAMGGLDPHGLNVGGLGGHLTPALGLGGVNSESQQCTL
VELGKILLTAARDGDTQEVCGVIRKGAPFTTDWLGTSPLHMAAQNGHVECCEVLLRAGIS
KDARTKVDKTPMHLAAQEGHVEVLELLLKHSCDKEALDMLYMTPLHWAVDRGNVGAVEML
LRFGADTNAVSKFDKTPMEIASDQGRPDIFEMLQNADSFLQIPVDPHESDAATLAATQSI
MDNDAMDHSASLLSPPGADLNGSEAPQVTKSPENDAVKFLEAHGITIQPEDSGGGALESH
LRTSKQTLTLTEAGKMLLNTNQGHRPTTVKKVIVSSKAGTSKISTLPVTTKLVAVSSAKN
VIPVSSGGMATIVVGSGPTKRILRVPPSQLAALKSRTSNIKIASPNKGTIAAASGSTGTK
LTVLRVNPHLKTVQGSPAVMQKFSSPNSTITLAPASNLVSSKGITTIVTEASGFAHGAPI
MVSSIKKEPAPTSPQPVQGDTLTLSRTELQKMLDAAKEEYREKMEAQEREMSRLRQQVEA
LAKGATFQSK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggccaactccggaatcttgatcgggatggacgacacgggttccggacccattacggtc
cagaccacagccatgggcgggctggatccccacggattaaacgtgggaggattggggggc
catttgacgcccgctttgggtttagggggcgtcaattccgagagccaacaatgtaccttg
gtggaactgggcaagattcttttgacagcggctcgcgatggcgacacgcaagaggtgtgc
ggcgtgatccgcaaaggcgccccgttcaccacggactggttaggcacatcgcccttgcat
atggcggcgcaaaacgggcacgtggaatgctgtgaagtgctcttacgggcggggatctcc
aaggatgcccgcacgaaagtggacaagacgcccatgcatttagcggcccaagaaggtcac
gtggaagtgttggaactacttctgaagcattcgtgcgataaagaagccctagatatgtta
tatatgacgcctctccattgggcggtggatcgcgggaatgtgggcgcggtggaaatgttg
ttacgatttggagctgacactaatgccgtgagcaaatttgacaagacccccatggaaatt
gcatctgatcagggccgtccggatatttttgaaatgcttcaaaatgccgactctttccta
caaatcccggtcgatccgcacgaatctgacgcggccactttggccgccacacagagcatc
atggataacgatgccatggatcattccgcctctctgttaagtccgcccggtgcggacttg
aatgggtccgaggctcctcaggttaccaaaagtcccgagaacgacgccgtcaagttcttg
gaagcgcatggcatcactattcaacccgaagattccggtggtggagccctggagtctcat
ctgcgaacctccaagcagacgttgaccttgaccgaggcggggaaaatgctcctcaatacc
aaccaagggcacagaccgacgactgtcaagaaagtgattgtgtcttccaaagcggggact
tctaaaatctccaccttgcccgtcacaaccaagttagtggccgtgtcttccgccaaaaac
gtgatccctgtcagctcgggtggtatggccaccattgtggtgggtagtggccccaccaaa
cggatacttcgcgttcctcccagccaattggcggccttaaagtctcgcacctcgaacatt
aagattgcatcccccaataaaggaacgatcgcggccgcctccggctcaacgggcacgaag
ctcaccgtattacgggtcaaccctcatttaaagaccgtccaaggctcccctgctgtaatg
caaaagttcagctctcccaattccaccatcactttggcaccagccagcaaccttgtgtct
tcgaaaggaatcaccacgattgtgacggaagcttcgggatttgctcacggggcccctatc
atggtcagctcaatcaaaaaggagcccgctccgacttccccgcaaccggttcaaggtgat
accctcaccctcagccgcaccgagttacaaaagatgctggatgctgccaaagaagaatac
cgagagaaaatggaagcgcaagaacgggaaatgtcccgactacggcaacaagttgaggcc
ctggctaagggtgctactttccaatcaaagtaa
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