Tigriopus californicus (tidepool copepod): 131888517
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Entry
131888517 CDS
T09700
Name
(RefSeq) AP-4 complex subunit epsilon-1-like
KO
K12400
AP-4 complex subunit epsilon-1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
131888517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131888517
Membrane trafficking [BR:
tcf04131
]
Endosome - Golgi transport
Others
AP-4 complex
131888517
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
INTS1_R4
INTS7_N
GNC1_N
Motif
Other DBs
NCBI-GeneID:
131888517
NCBI-ProteinID:
XP_059093374
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All DBs
Position
10:4389409..4392601
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AA seq
776 aa
AA seq
DB search
MSIMLNRTWNYLSQSLASSPTFGGYPGPRWTLPDNGTDQEDRTHHLPPVLAHFLQTLYLV
QTKSEESSLVLAHLKEIQAKLKETDVKPAVMADALVRAMACHTLGYDVKFIQIYALQLAQ
KGSILEKKMGYLACTLLLSENDELILLLINTILKDLKSQNVIEVNIALIAAIHLTPKEMA
PMLLPVLQEKTTHTKDFIRKKALICLESIMQKAPDYIPSLETTVYNCLSDPDPGVVGVAV
QVMRSVTLHNTTCDSGLIQPLIEILNQILDHKFPKDYVYHGVEAPWVQMDLMILLAVLLE
RSDWSDHHAGLISRSLLRSLEGVSPKETIGQAIIYQCIKTIAVMNQKTRGESKIYQQLVD
KSLFYINKCLQSKHNNMKYMGLASLYEFFRYPPTPKLTEVEQENVLACLKHPDDSIQRKA
LSFLYELANDENVTGICATLVEFIRSSKDPFQTEELIIKCMQVAKKLHQSNLGWYTGLLL
KLLQASKSNREVIVVEIQESLGAPLTDEEDSDKRSIRHKSGLKLSKVLENLCNKEKPPPI
VQRLFLWSLVQDFQTDVTANVSKVLEIGRQALALDLDSPESEKIVISSLDSVFCLIHLNE
CSHEDIVAFIELCAQQYKNPRIQDLALEIQFFWSNLADLQGMEKPDEECPDWTLSSADEF
VVKCLTEDQDLEVYDPRQKLISKSNSPLESESFRFTPYHVLEESPSKRSNPSKASKDHTD
DRIPVKQVWSIYGRLENPENPQATKSHGKEDANTFGKVDNLVDLESVALEALEDLS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcatgttgaatcgcacgtggaactacctctctcaaagcctggcctcttcgccc
acttttggcggctatcccggacctcgttggacgttgccggacaatggcaccgaccaggag
gatcggacccatcatctgcctccagttttggctcatttcctccagaccttgtacctcgtt
cagacgaaaagcgaagagtcctccctagtgttggcccatttgaaggagatccaagccaaa
ctcaaagaaacggatgtgaaacccgcggttatggccgatgccctggttagagccatggct
tgtcacactcttggttatgacgtcaaattcatacagatttacgccttacagttggcccaa
aaaggctccattctggagaaaaaaatgggttatctggcctgcactttgttgctctcggaa
aatgatgagctcatcctgctgctcatcaacacgattctcaaagatttgaagtcccaaaac
gtgatcgaagtgaatatcgccctgatcgccgccatccacctcacgcccaaagagatggct
cccatgttactgcctgttctccaagagaagaccactcacacgaaggatttcattcgaaag
aaagccctcatctgtttggaatccatcatgcaaaaggctcctgattatatcccatctctg
gaaactacagtttacaactgtttgagcgacccagaccctggtgtggtgggcgtggcggtt
caggtgatgagatccgtcacgttgcataatacgacatgtgactcgggcttgatccaaccc
ttgatcgagattctcaatcagatcttggaccataagtttcccaaggactatgtctaccat
ggagtggaagctccttgggttcaaatggatctgatgattttacttgcggttcttttagag
cgatcggattggtcggatcatcatgcgggtctgataagtcgaagtcttttgcgatctttg
gaaggagtgagtcccaaagaaacgatcggtcaagccattatctaccagtgcatcaaaaca
atcgccgtgatgaatcaaaagacacgaggagaatccaagatataccagcagctggtggac
aaatccttattctacatcaacaaatgccttcaaagtaagcacaacaacatgaagtacatg
gggttggcttctctctatgagttcttccgatatccacccacgcccaagttaaccgaggtt
gagcaagaaaacgtcttggcttgtctaaaacacccggatgattcgattcaaaggaaagct
ctctcgtttttgtatgaattggccaacgacgagaatgttaccgggatatgtgctaccctc
gttgaattcataagatcgtcaaaagatccatttcagaccgaggaactgatcatcaaatgt
atgcaagtggccaaaaagcttcatcaatcgaacttgggttggtacacaggtttactcttg
aagctactccaagcctccaaatcgaatcgagaggtgattgtagtggagatccaagaaagc
ctcggagccccactaaccgatgaggaggactcggataaaagaagtatccgacataaatcg
ggcttaaaactgtctaaagtgttggaaaatttgtgtaacaaagagaagcctccgcccatt
gttcaacgactcttcctttggtctttggtgcaggattttcagactgacgtgactgccaat
gtgtccaaagtgctagagattggccgacaagcgttagccttggacttggactcacccgaa
tccgaaaagattgtgatatcgtcgctcgattctgtgttctgcctcatccacctaaatgaa
tgctctcatgaagacatcgtagcgttcatcgagttatgtgcccaacaatacaagaatcct
cggatccaagatttggccttggaaattcagttcttttggtcgaatcttgccgacttgcaa
gggatggaaaaaccagacgaagagtgtccagattggactttgagttctgccgatgaattt
gtggtgaaatgtctgactgaagatcaagatttggaggtgtacgatcccagacaaaaactg
atctccaagtccaattcaccgcttgaaagtgaatcatttaggttcactccttatcacgtt
cttgaggaatcgccaagcaaacgttccaatccgtcgaaagcgtccaaggatcatacagat
gataggatcccagtgaaacaagtttggtcgatttatggacggttggagaatccagaaaat
ccgcaagcaaccaaaagtcatgggaaagaggatgccaacactttcgggaaagtggacaac
ttggtggatttggagtctgtggcattggaggcgcttgaagacttgtcttga
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