Tigriopus californicus (tidepool copepod): 131888612
Help
Entry
131888612 CDS
T09700
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator homolog
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131888612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131888612
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
131888612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
PAS_4
bHLH_NCOA
Per3-like_PAS-A
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
131888612
NCBI-ProteinID:
XP_059093495
LinkDB
All DBs
Position
10:complement(1354458..1358528)
Genome browser
AA seq
704 aa
AA seq
DB search
MAAAAAATQATGMAMGMAGPHAQMPNHHHHAAMMHAKRPLEDPNVGVGVGGVGGVGEDQR
LKYGRMDTEETGGMSADKEKFARENHCEIERRRRNKMSAYITELSDMVPTCNALARKPDK
LTILRMAVAHIKSLRGLSSTPPQNDASYKPSFLTDNELKHLILEAADGFLFVVSCDTGRV
IYVSDSVTPVLHHAQTEWFGTTIYDHIHPEDSDKVREQLSTSDSQNNGRILDLKTGTVKK
EGSQSSMRLCMGSRRGFICRMRLGQVSPESMGYMNRVRHRNVLGMSETGDSYTVVHCTGY
IKNWPPQGIQLDRSQEEELHGSSCCLVAIGRLQVTSMPNTHDLSGAESALEFVSRHNVEG
KFTFVDQRVIHLMGYNPRELLGKSCFEFIHNEDQTHMKESFDQVVKMKGQVMNFMYRFRA
KNNEWIWLRTNSFAFLNPYTDDIEYIVCTNSTAKTGAASSTMTSADPIVASASSGGTTTN
DYRHTPNSGLDYSLTGGSGGGRHQQDIYSSHMSQSQSANPSAASAALGAPPNNQQQQQQV
GPPPPQATPVYSYDQTSSPVAAYGSPGVQPGRASVGKNSGTPTPPQSAWTQPVTAPVPVV
PSSDAYHYSNLSPSRSPGLYRTPTHSAAASSMWHWQATAGNGQATGLELGHHLNPHPHEQ
HQLGDMLHVLGHHGAMAHSTAAGIPPPTHHGFENLGGMFTGQYQ
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgccgcagcgacacaagcaacaggaatggccatgggtatggccgggccc
catgcccaaatgcccaaccatcaccatcatgcagccatgatgcacgccaaaagacctctt
gaagacccaaatgtgggtgtgggagtgggcggtgtgggaggtgtgggtgaagaccaaagg
ctaaaatacggacgaatggacaccgaagaaacgggtggaatgagtgctgacaaggagaag
tttgcccgtgaaaatcattgtgaaatcgagaggcggcgtcggaacaagatgtccgcctac
atcactgagttgtcagatatggttcccacttgtaatgctctagcccgcaagcccgataaa
ctcaccatcctccgcatggccgttgcacatatcaagtctctccgaggcctttccagtacc
cctcctcaaaacgatgcctcctacaaaccctccttcctgactgataatgaactcaagcac
ctcatcctggaagctgccgacgggtttctatttgtggtctcttgcgatactggcagagtg
atatatgtgtcagattcggtgacgcctgtgctgcatcacgctcaaacagagtggtttggc
accacaatttacgaccacatccatccggaggactcggacaaggtccgagagcagctttca
acctcagacagccaaaacaatggccgcatcttggatctcaagactggcacagtcaagaag
gaaggtagccaaagttccatgcgcttgtgcatgggttcccgtcggggattcatttgtcga
atgcgtctgggccaagtcagtcccgagtccatgggctacatgaacagagtgcggcaccgg
aacgtcttgggaatgagtgaaactggtgatagctacacggtggtccattgtacgggctac
atcaagaactggcctccgcagggaatccagttggaccgctcccaagaggaggaactgcat
gggagctcatgttgtctcgttgccattggccgtctccaggtcacatcaatgccaaatacg
catgacttgtccggtgctgagagtgccctagagttcgtgtcccgtcacaatgttgagggc
aagttcacctttgtcgaccagcgtgtcattcacctaatgggctacaatcctagagagctc
ttggggaagtcttgttttgaatttatccacaatgaggaccaaacccatatgaaagagtcc
tttgatcaggtagtcaaaatgaagggtcaagtcatgaactttatgtaccgattccgagca
aagaataatgaatggatatggctgcgtacaaactcctttgccttcctcaatccctacact
gatgacattgagtacattgtatgcacgaattcgacagccaaaacaggagcagccagttcc
accatgaccagtgccgatcccatcgtggcttcagccagcagtggaggaacgaccaccaat
gactaccgtcatacccccaattcgggtctggattatagtctcacagggggaagtgggggt
gggcggcaccagcaagacatctattccagtcacatgagtcagagccagtcagccaatccc
agcgccgcctctgcggccttgggtgcaccccctaacaaccagcaacagcagcaacaagtg
ggaccacccccaccccaggccaccccggtctattcttatgaccaaacatcatcgcctgtg
gctgcctatggttcgccaggtgtgcagcctggtcgagcttccgtgggtaagaacagtggc
acgcccacgcctcctcagagtgcgtggactcaaccagtgacggccccagtgcccgtggtt
ccatcaagtgacgcctaccattatagtaaccttagtccgagtcgctcccccggcctttat
cggacacccacccactcagcagccgccagttcgatgtggcattggcaggccacggcgggc
aacggccaagccacgggccttgaactcggtcaccacctcaaccctcaccctcatgagcag
catcaattaggtgatatgctccacgttctcggacatcacggggccatggcccactcgacg
gcggccggcattcctcctcccacccatcacggttttgaaaacctgggtgggatgttcacc
ggtcaatatcaatag
DBGET
integrated database retrieval system
