Tigriopus californicus (tidepool copepod): 131888621
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Entry
131888621 CDS
T09700
Name
(RefSeq) voltage-dependent calcium channel type A subunit alpha-1-like
Organism
tcf
Tigriopus californicus (tidepool copepod)
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
131888621
NCBI-ProteinID:
XP_059093507
LinkDB
All DBs
Position
10:12006140..12050142
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AA seq
2335 aa
AA seq
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MSQAKKGATVVPMVILTNPSSLDESFSSTGEEEMEHRSRPDVTFQEDPDDMNDDVFQVET
QASVHQPAKTSTNRPNIIVNNFTTDLPRLPRKPSIRIKPLDGIVERDCEIEEQMESDEEN
HDRIKVVQDVEGEDGNNCLHPCGEDGLSDCSRRTSEISLYQQQRRVRLSIPFEPGHRLSV
PSSDNSEVLWSDPHIRDKVFRRRTAVHGLSPNTNLSIGAVMLAAAEQASRAREQKEAGLD
HRGLQKISSKSLLMGKRRSGSLDPFGSGPSSLFILSEKNFIRRTTKFLIECTPFEYTVLL
TIIANCVVLALEEHLPNGDRTPLAQKLEATEPYFLGIFTVEAALKILALGFVLHRGSYLR
NAWNIMDFIVVVTGYITILSPEDPTVLKAGAKSEDGVDLRTLRAIRVLRPLKLVSGVPSL
QVVLKSILKALAPLMQIGLLVMFAILIFAIIGLEFYSGALHKTCYSIDNLDETVTEGNKN
VPCHSDNPALAPIGAYTCNSNISICLEKWEGPNYGITSFDNIGFAMLTVFQCVTMEGWTP
ILYWTNDAMGNSFNSIYFVTLIVIGSFFMLNLVLGVLSGEFAKERERVENRQAFLKLRRQ
QQLERELNGYVDWICKAEEVILAEERTTDEERSHIMEARKRAANKRRKMQKLGKSRSTET
DDDDDEPDEETYLSDPRRKFGLSQASALRTRLRNQGGCCQRFWRCEKRVRFFIRSTVKQQ
WFYWFVIILVFFNTVCVAVEHYDQPPWLTHFLYYAEFVFLGLFITEMVVRMYALGPRIYF
ESSFNRFDCIVIVASVFEVLWTNCVEMAGSFGLSVLRALRLLRIFKVTKYWSSLRNLVIS
LLSSMRSIISLLFLLFLFILIFALLGMQLFGGAFNFPDGTPPSNFNTFAIALLTVFQVLT
GEDWNEVMYQGIESQGGHRSGMIYCLYFIILTLFGNYTLLNVFLAIAVDNLANAQELTAA
ENQAENEDQNESTSAARNMEKQIQFMQGTQKLSELEMELRNGRSAYDDDIFVQKPILPYS
SMFILSSSNPIRIFIHGIVTFPFFDTFIMVIIIMSSIALAAEDPVQEHSERNHVLTYFDY
VFTGIFAVEMILKVIDLGVIAHPGSYLRDIWNLMDAVVVFCASISFIFEITGSSTGQNLS
TIKSLRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVFNILIVYLLFQFIFAVIAVQLFN
GKFFYCTDRSKHFAEECQGEYFVFSSYNRPPTVFPRLWQKQKFHFDNVAAAMLTLFAVQT
TEGWPAILQNSMAATYEDRGPIQLFRIEMSLFYIVFFIVFPFFFVNIFVALIIITFQEQG
EAELQDGEIDKNQKACIDFAIQAKPLERYMPKERDSFKYKIWRVVVSTPFEYFIMILIVL
NTILLMMKYYKQTETYKVTLHYMNTTLTGLFTLECVMKIFSFGFRHHGAPLLLSDILSYM
NTFFTLFFTIECTLKLISFGCRSYFKDPWNIFDFITVLGSIVDALMVEFAKNFINVGFLR
LFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGSMAFEP
DSEYNRHNHFQTFMAGLLVLFRCATGEAWPSIMLSCEAGRPCDSKAMTFNETLGRFEPKT
CGSTLTYAYFVSFIFFCSFLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFIRIWAEYDP
SATGRIQYAEMYEMLKNMDPPLGFGSKCPDRLAYKKLIRMNMPLDNEGKVHFTTTLFALI
RENLSIKMRSAEEMDQADVELRETILKVWPFTARDKIELLVPTTKDIGKGKLTVGKIYGG
LLILENWKGSKFGTIPMQKRGSLLQRIMDLSTNHMARGEANTLNLERGGLAPDERDEGQR
DNDDDDQENEPKETDLLLSQSHNQDISTQFHRQHDHSPPLAGHYLPENLRAAKSETFHTS
IVRAPRSFDQHKIGGLQDLFNRAGSVNLNHREHHPDIHHRDEGISKWRSESPGEYEWNPA
PRRREQAYDAGDTVSGVMEFMRHESRRFAPASNESSYPDQDRFDSIPGKMRKVHAEDGGM
YADYRYQPHLHHPQQTPPFGSHRRIGYGGREFEELSRVPEDHEMWPPMHKSGRFHLPGEI
GDYFDEEEEHADEEAIYSRMGHIPTDSQNFLSHRRQHVSARGEPMARSWRRPSGRRLPAT
PTQPSTLNIDSLANISAINSSPQIPAGGVNRMGLDIGDQAPRIAPVTSTNALTTPMNFPK
LNISPSRGQTSRIGARLPDLPTMNHRGLPSRQGGWSRSLDDPVAFEEAVIAGRGSRQLPM
VGPQQIASARGRGIRTGRRELPRPGTTIGFAPASGHGYQMKRATSLSESDEEDWC
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagctaaaaagggagccactgtcgttccaatggttatattaaccaatccgtcc
tcattggatgagtccttcagttccacgggtgaggaggaaatggaacatcgttcgagaccc
gatgttacgttccaagaggatccagatgacatgaacgatgacgtgttccaggtagaaacc
caagcctccgttcatcaaccggctaaaacctcgaccaatcgtcctaacatcatagtcaat
aacttcaccactgatctgcctcgcttaccccgaaaaccatcgatccgaatcaagcctttg
gatggtattgtcgagcgcgattgtgagattgaggaacaaatggaaagtgatgaagagaat
catgatcggatcaaggtggttcaagatgtagaaggcgaggatggtaataattgccttcat
ccttgcggtgaagacggcctcagtgattgttccaggcgaacaagtgaaatttcgctttac
caacaacaaagacgggttcgactatcgatcccttttgagccagggcaccgattatccgtg
cccagtagtgacaatagtgaggtgctttggtcagatccccatattagagataaagtgttt
cgaagaagaacagccgttcacggtctcagccctaataccaacctaagcattggagcagtt
atgttagcggctgcggagcaagccagtcgagctcgtgagcaaaaggaggctggacttgac
catcgaggtttgcagaaaatctcgagcaagagccttctcatgggaaaacgacgcagtgga
agcttggacccgttcgggtcgggtccatcgtctcttttcatcctcagtgagaagaacttc
atacggaggaccaccaagttcctgatagaatgcactccattcgaatataccgtcctactc
acaatcattgccaattgtgtggtcctcgctttggaggagcatcttcccaatggcgaccga
actccactggctcaaaaactggaggcaaccgagccttacttcctcggaattttcacggtg
gaggcggcgctcaagatcttggccttgggcttcgttcttcaccgtggcagttaccttcga
aatgcgtggaacatcatggacttcatagtcgttgtgactggatatatcactattttaagc
cccgaagacccaactgtgcttaaggcaggagccaagtctgaggatggcgttgatttgaga
accctgagagctattcgcgtccttaggcctctcaaattggtctcgggggtgccaagttta
caagtggtcttaaagtccattttaaaggcccttgctcctctgatgcaaattggcctcctt
gttatgtttgccattctcatcttcgccattattgggctggaattctattccggagccctc
cataagacatgctattccattgacaatctagatgaaaccgtaacagaagggaacaagaat
gttccctgccactcggataatcctgccctcgcccctattggcgcctacacgtgcaattcc
aatatttccatttgtctcgaaaagtgggaaggaccaaattatgggatcacgtctttcgat
aacatcggattcgctatgctcactgtcttccaatgtgtgaccatggagggatggactccc
atcctttattggaccaacgacgccatgggaaactcgttcaattccatttattttgtcacc
ctgatcgtcattggttcatttttcatgctgaatctggttctgggtgttctcagtggagaa
ttcgccaaagagagggaacgcgtggagaatcgacaagcgttcctcaagcttcgccgacaa
cagcaattggaacgcgagttgaatggatatgtggattggatctgcaaagcagaggaggtg
atcctcgccgaggaaagaaccaccgacgaggaaaggagtcacattatggaggctcgaaaa
cgagcggccaataagcggaggaagatgcagaagttggggaaaagtagaagcactgagacg
gatgacgatgacgacgagcctgatgaagaaacttatctctctgatccacgcaggaaattc
ggactgagccaggcctcggctcttcgaaccagattgaggaaccaaggtggatgttgccag
cgtttttggcggtgcgagaaacgggtcaggttcttcattcggtcgactgtgaaacagcaa
tggttctactggttcgtgatcatcctggttttcttcaacactgtttgtgtggctgtggaa
cattacgaccaacccccatggttgacgcacttcttgtattatgccgagttcgtgttcctg
ggtctattcatcacggagatggtggttcgaatgtatgccctcggtccacggatctacttc
gagtcatcgttcaaccgctttgactgcattgtgattgtggccagtgtgttcgaggtgtta
tggaccaattgtgtggaaatggccggttcgtttggactctcagtcctacgagccttgagg
ctattgagaatattcaaagtaacaaaatattggtcatctctgcgaaacctagtgatatcc
ttgctgagctcgatgcggtccattatctcgttgttattccttctcttcctcttcatattg
atctttgcacttctggggatgcaactctttggaggtgctttcaatttcccggatggaaca
cctccctctaatttcaacaccttcgccattgctttgctcaccgttttccaagtgctcact
ggcgaggattggaacgaggtgatgtaccaagggattgagtcccaaggtggtcatcgctcg
ggtatgatctattgtctttacttcatcatcttgaccctctttggcaattacactctcttg
aacgtgttcttggccattgccgtggacaacttggccaatgcacaggaactgaccgcggcc
gaaaaccaggctgagaatgaggatcaaaatgaatcgacctcagctgccagaaacatggag
aagcaaatccagttcatgcaaggcacccaaaaactatccgagttagagatggagctccga
aacgggcgctcagcctacgacgatgatatctttgttcaaaagcccatactgccctattcc
tccatgttcatactttcatcttccaatccgattcgcatcttcatccacggcatcgtgacg
tttcctttctttgacacgttcattatggtgatcatcataatgagcagcatcgctttggcg
gctgaagatcctgtgcaagaacatagtgaacggaaccatgttctcacctactttgattac
gtttttaccgggatttttgctgtcgagatgattttgaaggtgatagacctgggtgtcatt
gcccaccctggttcgtacttgcgtgatatttggaaccttatggacgctgtggttgtgttt
tgtgccagtatctcgtttatctttgagattacgggaagctccacgggtcaaaacctgagc
acaattaagtccttgcgcgtgctacgcgtgttgcgcccactgaaaaccatcaaacgagtg
cccaagctgaaagctgtctttgattgcgtggtcaactcgctcaagaatgtgttcaatatc
ctcatcgtctacctactattccagttcatttttgcggttattgcggtccaactcttcaat
ggaaagttcttctattgtacggacaggagcaagcactttgccgaagaatgccagggcgaa
tactttgtcttctcgtcctacaaccggcctccaacggtgttccctcgactttggcagaaa
cagaagtttcactttgacaacgttgctgcggccatgttgactttgttcgcagttcaaacg
actgagggatggcctgcgatcttacaaaactccatggcagccacctatgaggatcgaggg
ccaatccaactattccgcatcgagatgtcgctcttttacatagtgttcttcatcgtgttc
ccattcttctttgtgaacatttttgtggccttgatcatcatcacgttccaggaacaaggt
gaagctgagctccaagacggagaaatcgacaagaatcagaaagcttgcatcgatttcgcg
atccaagccaaacctctggagagatatatgcccaaggaaagggacagttttaagtacaaa
atatggcgggtggtggtctccactccttttgaatacttcatcatgatcctcatcgtgttg
aataccattcttctgatgatgaagtattacaagcagactgagacgtacaaggtgactctg
cactacatgaacactacgctcactggactgtttacgcttgaatgtgtcatgaaaattttc
tcgttcggatttcggcatcacggagctcctctccttctcagcgacattctcagttacatg
aacacgttcttcactttgttcttcactatcgagtgcactctcaagctcatttcattcggc
tgtcggagctacttcaaagacccatggaacatttttgacttcattacggtcctggggagc
atagtggacgcgttgatggtggaatttgcaaaaaactttatcaatgtgggctttcttcgc
ttgtttcgagctgctcgtttgatcaagctccttcgacagggttacacaatccgtattctt
ctgtggacattcgtccagtctttcaaagccctaccctacgtttgtttgttgattgccatg
ttgttcttcatctatgccattattggaatgcaggttttcggaagcatggctttcgagcca
gattcggaatataatcgacataatcatttccaaaccttcatggcaggccttttggtcttg
ttccggtgtgccactggggaggcgtggccgagtataatgctgtcttgcgaggcaggcaga
ccctgtgattccaaagccatgaccttcaatgagaccttgggtcgttttgagccaaaaacg
tgcggctccactctcacatacgcttatttcgtgtctttcatcttcttctgctcgttcctc
atgctgaatctttttgtggctgtcattatggacaactttgattacttgaccagagactcg
tccattttgggagctcatcatttggacgaattcatcaggatttgggcggaatacgatccc
agcgctacaggaaggatacagtacgcggaaatgtacgagatgttgaaaaatatggacccc
ccattagggtttggctccaagtgtccggatcgattggcctacaagaaactgattcgaatg
aacatgccattggataatgagggcaaggtgcatttcaccacaacgctctttgctttgatc
agagagaatctgagcatcaagatgagatcggccgaggaaatggaccaagccgacgttgaa
ctaagggagaccatcctcaaagtgtggccatttacggccagagataaaatcgaacttctc
gtgccaaccaccaaagacattggcaaaggaaaattgacagtgggaaaaatatacggtggc
ctgctcatcttggagaattggaaaggctccaagtttggaaccattcccatgcaaaagcgc
ggatccctgctccaacggatcatggacttgagcaccaaccacatggcgaggggagaggcc
aatacgctcaacttagagcgaggaggcctcgcacctgacgaaagggacgaaggccaacgc
gacaacgacgacgacgaccaggagaatgagcccaaagagactgacttgcttttatcccag
tcgcataatcaagacatctcgacccaatttcatcgacagcacgaccatagcccaccccta
gcgggccattacctccccgaaaacttgcgtgccgcaaaatccgaaacgtttcacacaagc
atagtccgagctccacgctcttttgaccaacacaagatcggcggacttcaagatcttttc
aatcgagccggatctgtcaacttgaatcatcgagaacatcatccagacatccatcatcgt
gacgagggcatttccaaatggagaagtgaatcccctggagaatacgagtggaatcctgcg
cctcgacggcgggaacaagcctacgatgcgggagacacggtttcgggcgtcatggagttc
atgcggcacgagtctcgacgattcgcgccagcatccaatgaaagcagctatcccgaccag
gaccgttttgatagtattccagggaaaatgcgcaaagttcacgccgaggatgggggcatg
tatgccgattaccgatatcaacctcatctacaccacccacaacaaacccctccatttggc
tctcatagaaggatcggttatggaggacgggaatttgaagagttgtctagagtgccagaa
gatcatgaaatgtggcccccaatgcacaaatcagggagattccacttacccggtgaaata
ggtgactactttgacgaggaagaagagcacgccgatgaggaagctatttacagtcgaatg
ggtcacattccaactgatagtcaaaattttttgtcccatcgaagacaacatgtttccgcc
cgaggcgaacccatggcaagatcttggcgaaggccaagtggtcgcagactccctgccaca
cccacacaaccatccactttgaacatagactcattggccaacatttcagcaatcaacagc
tcgcctcaaatcccagcaggaggcgtgaatcgaatgggcttagacattggcgaccaagcg
ccccgcattgctcctgtcacctcaacaaatgctctcactacccccatgaacttccccaag
ttgaacatttccccgtcacgtggtcaaaccagtcggattggagcgcgactgcctgatctg
ccgacaatgaaccacagaggcttacccagtcgtcagggaggatggagtcggagcctagat
gatcctgtggcctttgaagaagctgtgatcgcaggccgaggaagccgccagctgcccatg
gtagggcctcaacaaatagcaagtgctcgaggccgtggaattcgaaccggtcgccgagag
cttccacgaccgggcaccaccataggtttcgctcccgctagtggccacggctaccaaatg
aagcgcgcaacctcgctcagtgaaagcgatgaagaggattggtgttga
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integrated database retrieval system
