Tigriopus californicus (tidepool copepod): 131888651
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Entry
131888651 CDS
T09700
Name
(RefSeq) neogenin-like isoform X1
KO
K06766
neogenin
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
131888651
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tcf04515
]
131888651
Cell adhesion molecules [BR:
tcf04515
]
Immunoglobulin superfamily
DCC/UNC5 family
131888651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
ig
Ig_2
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Pur_ac_phosph_N
Neogenin_C
Ig_RIMBP2
Unc5_NetrinR_N
C2-set_2
Fn3_R-PTP-O
NDNF
Ig_4
Ig_6
NSP2_assoc
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
131888651
NCBI-ProteinID:
XP_059093547
LinkDB
All DBs
Position
1:3488836..3526383
Genome browser
AA seq
1546 aa
AA seq
DB search
MGTSPKHRVRSIYRKRHPILNLDEGCTMRVPIILLILATLKCSWISCQGMFPEFRFLDEP
EDTLVVKNQPATLKCSAVGPRPPKIRWKRNGEFLQFPDFNDRRYVEDIDGRRLQSDGSLY
FSTIYHKRSSQPDEGLYQCVASVDGLGTIVSRMASLQVSELTRFETEPEDQTVFLGQTAV
FQCSMTSLDHTDLEIVWLKDDQNLFLDHRMKILPSGMLAIADIRISDRAEYRCNASNEET
WKLSQIGHLRLNLDMVLSNTPVPPMFIARPKNLKAEEGQTLTLDCAANGIPKPFITWLKD
GSTVDLSHLDSRFTKIGSGSLQIKNVQVNDKGTYQCRAENSEDSVDAGSILEVRVKPRFI
RTPQSTAAVVKDDIELECEVYGVPNPVVQWYKKGDLIIESEYFQIVRGSNLKILGLVELD
SGFYQCMASNPIGNVQASAQLLVKPQDSKSYNNHGFTSNHLRTPSASQPDQKSRSNLGEL
VFRDTPSPPTNIRAVIVSARFITLSWTKPAVTNGPLLGFSVYYKERGSNRERVLNSTRGN
LEELNVQGLVPGTRYIMRVVAHNEHGAGDSSQPLEVSTQDELDVPGPVSQLTARPTSSFS
ILISWGKPSYSNTFVTSYKLYYRRDDEMEVKSMTLNSLQYHLTELREYTEYTFWISAFNS
NGEGAFSEEIVTRTFSDVPADPPQNVTLEADSSKSLIIRWEPPPKESQNGILTGYKIRWR
RKGKGKSDIFTTDGSRRLFAITGLDNGQEYQVKISAITVNGTGPATPWMSERTFDTDLDE
SVVPNPPNSLKAKAYDSRIEISWTPPRDNKILVRGYTIGWGKGIPDEYTKVVDDKQRDFA
IKGLKPNSEYVISLRAYNNIGDGRPIYETIRTSDEIHDEPLSPFSPPIKLHARILSSKTA
LLTWLDSSLPKNQVIPDHRYYIVRYTSVKTLSTNKPRHEYRNSTDLNVMIDNLRPSTEYE
FTVKVVKGRRQSRWSLVALNHTEEAAPGSPPRDLSLRSKSGDPETVVLSWRAPKIPNGQI
NGYVIHYTIDKRAEDRDWYVKPLLGDHTTTTISNLVPSTKYFFKISARNSKGSGPVSLVA
SYTTPRGMIGDYSGSESNPANQEISPVILYAVAGVASGIIILVVIGAVFVVLRCTRSNSS
APGPSGQGNKRQNHNGNKPYLNGEIGSQRDKLNPPPPDLWIGHDQLELKAMSDVDPDETG
ETSIARSTPIDYASGRSMSSIDRGRGYGMAYSDGGTESEVSFSLAGSSICRGVSINKSKR
IKGGAAHGSNKSSIKIAAINGKPRVQRYLSHESVASSIPGQPNGAPGSTSSTYIRSQYSL
NPPPPLGSPDDLPPPGYAPSDAPSTIEDNSGWGANTTASSIDGGSQMGMANGTCSIAVAP
PMLPPTYLSSAMSTSSGDSSSGGSRQSSSNHSQPMKSFSHIIPGANHQHHHHHHQPQPKN
IVRPQPTSPFKRPLLSGFASSSSPPGSSDSCSSKADPDGTPMHSGQLPALGLIRSPDILN
SLSHQITPSLSTEELREEMKNLEGLMKDLNTISKSSQGTNIHRYPC
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgggaacatccccgaaacatcgcgtacgctcaatctatagaaaaaggcatcccatcctt
aatttggatgaagggtgcacaatgagggtcccaatcatattgctcatcctcgccacacta
aagtgctcctggatttcttgtcaaggcatgtttccggaattccgattcctagacgaaccc
gaggacactctggtcgtgaaaaatcagccggcaaccctgaaatgctccgctgttggacca
agaccgccaaaaataaggtggaaacgaaacggagaattcctacagttcccggactttaat
gatcgacgatatgtggaggatattgatggccgacgactccaatcggatggttccttgtac
ttctcaaccatctaccacaaacggtcttcgcagccagatgagggcctttaccaatgtgtg
gcttcagtggacggccttggcaccattgtgtcgcggatggcctcgcttcaagtctcagag
ttgacgcgttttgagaccgagcccgaggatcaaacggtgtttctgggccaaacagcggtg
ttccaatgttccatgacatcattggaccacactgatctggagattgtctggctcaaagac
gatcagaacctgtttcttgaccatcgaatgaagatattgccctcggggatgttggcgatc
gctgatattcgcatttcagatcgggctgaatatcgctgcaacgcctcaaatgaagagact
tggaaattgagtcagatcggacatctccgactcaatttagacatggttttaagcaacacc
ccagtcccacctatgttcatcgcgagaccaaagaacttgaaagctgaggaaggccaaaca
ttgaccttggattgcgctgccaatgggatccccaaacctttcatcacgtggcttaaggat
ggatccaccgtggacctcagtcacttggactcgcgattcaccaagattggatcgggcagc
ttacaaatcaagaacgttcaagtgaacgataaaggcacttatcaatgtcgagcagaaaat
tccgaggactcagttgatgctggatcgattttagaggttcgagttaagcctcgatttatt
cgcaccccccaaagtacagcggctgtggtgaaagacgacattgaactggagtgcgaggtt
tacggagtgccaaatcccgtggtccaatggtataaaaaaggtgatctcatcatagaatcg
gagtacttccagattgtccgtgggtccaacctcaaaattctgggtcttgtagagcttgac
tctggattctatcagtgtatggccagtaatcccattggaaatgttcaagcctctgcccag
cttctagtcaaaccacaagattccaaatcttataacaaccatgggtttacatccaaccac
ctgaggaccccctctgcgtcccaacctgaccagaaatctcgttccaatttaggtgagctc
gtctttagggacacgccctctccgcccacgaatattcgggccgtgattgtgtcggcgcgt
ttcatcaccctctcttggaccaagcctgcagtgaccaatggacctctcttaggtttctcg
gtctactataaagaacgtggatccaacagggaacgtgttctaaattccactcgaggaaac
cttgaggaattgaacgtgcagggacttgttccgggaaccagatatatcatgcgagtagtc
gcccataatgagcatggagctggagattcttcccaacctttggaggtgtcgacacaagac
gaacttgatgttcctggaccagtttctcaactgacagctcgtccaacgtcatcattttcc
atcttgatctcgtggggaaagccatcctacagcaacacttttgtcacaagttacaagctc
tactacagacgggacgacgaaatggaagtgaaatccatgaccctgaatagcctccaatat
catctcacagaattgcgcgagtacacggagtacacattttggatctcggccttcaattcc
aatggggagggagccttttctgaagagatcgtcactcggaccttctcggatgtgcccgcg
gatccgcctcaaaatgtgacattggaagcggattcctcgaagtctctcatcattcgatgg
gaacctcctcccaaggaatcgcaaaatggtattttaacgggctataaaatccgctggagg
cggaaaggcaagggtaaaagtgacatctttaccaccgacggaagccgtcgactttttgcc
atcacgggtctagacaatggccaagagtatcaggtcaaaatatcagccattaccgtgaat
ggaacgggtccagccacaccttggatgtcggaacgcacttttgacaccgatctggatgaa
tcggtggtgcccaaccctccaaattctttgaaggcaaaggcctatgatagcaggatcgag
atctcttggacacctcctcgagataacaagatactcgttcgaggttataccattggctgg
ggtaaaggcatcccagatgaatatacgaaggtggtagacgacaaacagagggactttgcc
atcaaagggttgaagcccaactccgaatatgtgattagtttacgagcttacaacaacatc
ggggatggtcgacccatttatgagaccattcgcaccagcgacgagattcatgacgaaccc
ctgtccccgttctctccccccatcaaacttcacgcacgaattttgtcgtcaaaaacagca
ttgcttacttggttggactcttcgttgcctaagaaccaagtgatcccggatcatcggtat
tacattgtgcggtacacctctgtcaagaccttaagcaccaacaaaccccggcacgaatat
cgaaactcgaccgatctgaacgtgatgattgacaatttgagacccagtacggaatacgaa
ttcaccgtcaaagttgtcaaaggccgtagacaaagtcgatggagtcttgtggcgttgaac
cacaccgaagaggcagctccgggttcaccccctcgtgatttgtccttgcggtccaaatct
ggcgatccagagaccgttgttttgagctggagagcacccaaaatccccaacggccaaatc
aacggttatgtgattcattacaccatcgacaaacgggccgaggatcgggattggtatgtg
aagccgttgcttggggatcatacgaccaccaccatctccaacctcgtgccgagcaccaaa
tatttcttcaagatcagcgcccggaatagtaagggtagcggtccagtcagtcttgtcgct
tcttacaccacccccaggggcatgattggggattatagtggttcagaatccaatccagcc
aaccaagagatttcgccggtgattttgtacgcagtggcgggtgtggcctcgggtatcatt
attctagtcgtcattggagccgtttttgtggtgctccgttgtactcgcagcaatagttcc
gctccaggaccttctggtcaaggaaataagcgccaaaaccataatggtaataaaccctat
ctcaacggtgaaattggatcccaaagagacaagttgaacccacctccacccgatctttgg
attgggcacgatcaacttgaactcaaagccatgtccgacgtggacccggacgagactggt
gaaacgtccatagctcggtccaccccgatcgattatgccagtggtcggtccatgtcttcg
atagaccgtggtcgtggttatggtatggcctattctgatggtggaaccgagtccgaggtt
tctttttcgttggcgggttcgagtatttgtcggggtgtttccatcaacaagtcaaagagg
atcaaaggaggtgctgcccatggctcgaataaatcaagtattaagattgctgccattaat
gggaagcctagagtccaaagataccttagtcatgagtctgtggcatcatcgatacccggg
caaccaaacggagcccccgggtccacctcaagtacctatatccgctctcagtacagtttg
aacccccctccgcccttgggttcgcctgacgatctcccccctccgggttacgctccctcg
gatgcgccttccaccatagaagacaattctggctggggtgccaataccactgcttcctca
atcgacggtggctctcaaatgggcatggccaacgggacttgctcaattgcagtggctccg
cccatgttacctcccacctacctgagctcggcaatgtcaacttcgagtggtgacagttcc
tcgggaggaagccgacaatccagttcaaaccactctcagcccatgaagagcttttcccat
ataatccctggggccaatcaccaacaccaccatcaccaccaccaaccacaaccaaagaac
atagttcgacctcaacctacgagtccgttcaaacggccactgctttccgggttcgcatcc
tcatcctctccccctggatccagtgattcatgcagttccaaagcggatccagatggcaca
ccgatgcattctgggcaacttccggctctcggattgattcgatcacctgatatcctcaac
tcattaagtcatcaaatcacaccgtcattgagtacagaagaactcagagaagaaatgaag
aacttggaagggctcatgaaggatctcaacacgatctcaaagtcaagccaaggcaccaat
attcatcggtatccatgctga
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integrated database retrieval system
