Tigriopus californicus (tidepool copepod): 131888670
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Entry
131888670 CDS
T09700
Name
(RefSeq) prominin-like protein
KO
K06532
prominin 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131888670
04090 CD molecules [BR:
tcf04090
]
131888670
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
131888670
CD molecules [BR:
tcf04090
]
Proteins
131888670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Baculo_PEP_C
Tweety
DUF1664
Apolipoprotein
DUF3810
SUR7
Motif
Other DBs
NCBI-GeneID:
131888670
NCBI-ProteinID:
XP_059093571
LinkDB
All DBs
Position
10:13394739..13399370
Genome browser
AA seq
992 aa
AA seq
DB search
MVRTVQRISARGLLSPGVIVLAAGLLLGCGSAQVVGDAGQFSPLTVESTTVGIRVLSQHK
VIYSDPPVSRNYDSQSTFNPRGMKQVYALTHIFLDLIQRRDVLPDSLNASVLMDTPAEQV
PVVLEEHWEEILLQYIGVVTTAVCGLLLALLIPLACLCTCCCRCAGKCGADNEHFDKKSD
ACKRFSLGVVVALFVITAMFGVVCAFVTNYYMYDGTRQLPKRVQMATQDTSQYLDNTGRE
INTLLVSNFAELEEVLNEILDESGPILKRSLAEVTEAVAIDDLTDIVSNLGNVKRYLRDI
QEKTFILQDKVGQLKLGLDGTRTRLMRAMAQCSASRACEKFLSEYNITRDLAVATDFSSL
PTNLPDLSLLMKDISDLMNNDIERKVRGGQQQLNKVKTDIERSIGDIRPRIKSEIRNMGK
QLEDQAAEIQRILNEFDANVAAVTTDVPKIQPTVSEIGSYMFYIGLGMSLMVLLILVCYI
FGLFYGFCGQRPGNVYGDECCNTGTGANWLVAAVYLTFLFSFVLLLVATAQFVLGSSVEK
VVCQALHKPNESDMFDLVDQKFIQPMIKQHRPKSGDHDWNMTVHELITNCHKNKTIYELL
QVQNVYNVEELRTWRDDYDIGSSVENLKAKIRLDDLKGIQILSPEAEKELQDLAESDISD
LNFAQYTNLLREKITSIDLATFTARLRQMREGLSPNQGRLVGPAIENEALFLDQMQRVVM
EMKLAMKDLVNSVEALEHEAQHAKPNLREALRGLIKQATQATQFLRTEGPELVIKLTDQY
VNETIGLIDDYVERVVTRTQQDVGRCEPLSNSYNATVIAVCNEIVDPFNGLWASIGWCVM
IFLPCIVLALNLVSLYRKSEPYPGPLVEVIPVEESSHVKKKKRGHRRNASEYLPDSAHYR
AGYSYQNTSGSSENRFQDMAPRNSYDNPQPSTSGVNPGTSSSSSGPPRYSSNPSLIGNPP
SEYERPPPYYFPGSAPIADAPPPLPAPNQSRN
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggtcagaactgtacagagaatctccgccaggggcttattaagccctggtgttatagtg
ctagccgcaggcctgctgctcggctgcgggtccgctcaagtggtcggggatgcgggtcaa
ttctcaccgctgaccgtcgagagcacgacggtgggtattcgggtgttgagtcagcacaaa
gtgatatacagtgacccgcctgtgagtcggaactacgactcccagtccacgttcaatccc
cggggcatgaagcaagtgtacgctttgacccacattttccttgatctcattcagcgccga
gatgtcttgcctgactcgctcaacgcctccgtactaatggacacgcctgctgaacaggtg
cccgtggtcttagaagaacactgggaagagatcttgctccagtatattggcgtggtgacc
accgccgtgtgcggactactcttggctttgctcatcccgttggcttgtctctgcacgtgt
tgttgtcgatgtgcgggcaaatgcggcgcggacaacgagcatttcgacaagaagagcgat
gcctgcaaacggttttccttaggagtggtcgtggctctctttgtgatcactgccatgttt
ggtgtggtttgcgcctttgttaccaactactacatgtatgatggcacccgacagctccct
aagcgggtccaaatggccacccaggataccagccagtacttggataacactgggcgtgag
atcaataccctactggtgtccaactttgccgagctcgaagaggttttgaacgagatcctt
gatgaaagcggtcccattctcaagcgcagtctggccgaggtgactgaggccgtggccatt
gatgatctcaccgacattgtatcgaacctaggcaatgtcaaacgctacctccgcgatatc
caagagaaaaccttcatcctacaagataaggtgggacaactgaagttgggcttggacggg
actcgaacccgcctcatgcgagccatggcacaatgcagcgctagtcgggcttgtgaaaaa
ttcctctctgaatacaacatcacgcgagacctggccgttgccacggatttcagctccctg
cccaccaatctcccggatctgagtttgctcatgaaggacatctccgacctcatgaataac
gacatcgaacggaaagttcgcggtggacaacagcaactgaataaggtcaagactgatatt
gagcgctccatcggggatatccgtcctcggatcaagagcgaaattcgcaacatgggcaaa
caactcgaagatcaggcggcagagattcaaagaattttgaacgagttcgacgccaatgtg
gctgctgtcaccactgacgtgcccaagattcaaccgactgtcagcgaaatcggaagctac
atgttctacattggcttgggcatgagcctcatggtgctgctcatcttggtgtgctacatc
ttcgggctcttctatggcttctgcggccaacgtccgggtaacgtctacggtgacgagtgc
tgcaataccggtacgggggccaattggctcgtggctgcggtgtacctcacatttttgttc
tcgtttgtgttgcttctggtggccacggcccaattcgttttgggctcgtccgtggaaaag
gtggtgtgtcaggccctacacaaacccaacgagtccgacatgttcgaccttgtggaccaa
aaatttatccaacccatgatcaaacaacatcgaccaaagtcaggggaccatgactggaac
atgaccgttcatgagctcatcacgaactgccataagaacaagaccatttatgagctccta
caagttcagaatgtgtacaacgtggaggagctccgcacttggagggacgactacgatatt
gggagttccgtggaaaacctcaaggccaagattcgattggatgacctgaagggcatccag
atcctctcacccgaggccgagaaagaattacaggatttggccgagtcggatatctcggat
ttgaactttgcgcagtacaccaatcttttgcgggagaagatcacctccatcgatctcgcc
acgttcactgccagacttcgtcagatgcgagaaggcctgagtcccaaccaaggccgacta
gttggcccagccattgagaacgaggccttgttcctcgatcagatgcaaagggtggtcatg
gaaatgaagctggctatgaaagatctggtcaattccgttgaggccctcgaacatgaggcc
caacatgccaagccaaatctcagagaggcccttcgaggtcttatcaagcaggccacacaa
gccactcaattcttgcgcacagaaggccctgagttggtgatcaaactcacggatcagtac
gtcaacgagaccattggcctcattgacgactacgtggaacgggttgtcactcgcactcaa
caggatgtcggccgatgtgagcccctctccaacagctacaatgccaccgtgatcgccgtc
tgcaacgagatcgtggacccattcaacggcctttgggccagcatcgggtggtgcgtcatg
attttcttgccttgcattgtgctagctctgaatttagtctcgctctaccgcaaatccgag
ccctacccaggaccattggtggaggtgattccggtggaggagtcgtcccacgtgaagaaa
aagaagcggggccatcgccgcaacgcgagtgaatacctaccagattctgctcactatcgg
gctggctactcctatcaaaataccagcggctccagtgagaatcgcttccaagacatggcc
ccgaggaatagttacgataatccacaaccttcgacatccggggtaaatcccggaacatcc
tcctcctcctcgggaccacctcgatactcgagcaatccgagcttgattggaaatcctccg
agtgaatacgaacgcccaccgccatactacttcccgggttcggctccgattgctgacgca
cctcccccacttcctgctcccaatcaatctagaaactga
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