Tigriopus californicus (tidepool copepod): 131888671
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Entry
131888671 CDS
T09700
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04144
Endocytosis
tcf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
131888671
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131888671
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tcf01009
]
131888671
Protein phosphatases and associated proteins [BR:
tcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131888671
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
PDZ
Par3_HAL_N_term
PDZ_6
PDZ_2
HTH_38
DNApol_Exo
Motif
Other DBs
NCBI-GeneID:
131888671
NCBI-ProteinID:
XP_059093575
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Position
1:complement(3528660..3542394)
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AA seq
1258 aa
AA seq
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MKLTISFNGTKIVVPCGDGNITVKEFTSLATTRYKRAIGKHYDDDYWVSISSLKSYEGGM
LDSDDLICDVCDDREQLQAIFDEQHAMGGHGHLGDGMCSSDSDKEANTNSSASGSTVRLG
YPTNNIYQELQVRRGSDPALNKVVINSPAGDRPQITHHHGTLPPLPYLYGSTNEPRSMTS
EENYDSLPDSQTFDSKCSLHVLRRREPLGASANKPDKNKALEEFPNASNHHLASHPPTGG
PDRDEGSLMSGGRGSHQSHTGYQKHQMARPSVEVIIANEIGPLGIHVVPCDDDGRLIVQG
IEPGGRVDRDGRLAVGDEIVEINGYPLTTVSFNTAQEIFKEALFAKELRVQVIKGVSDVC
ALSDSENKENMDRNGKADAPPPPAGSKVTTAVQANNTRKIGKVLKITLTKGASGLGFSIT
TRDNAPGGQTPIYIKNIMPKGAAIEEGTLKPGDRLLEVNGTQVDGMSQSDVVALLRSAPM
NAELQIIVSRHGTVSGEESQSGTMKLKPKTDPLPPIPVQEEPAGPTSNTLNPETLSRPRS
TSPSNSTDNYESYDSENNFQFPWKQREILTFDIPVHDTERAGLGVSVKGKTSTNRDGSVT
DLGIFVKSVIYGGAASRDGRLKTNDQLVNINGLSLLGKANPQAMETLRKAMHEEGPMPGI
ITLTVARRCESDDPDSKVPAEKVKDERRDSISSQVTSSSDDIVRQYNVSPPKFKMPSSQS
HPTALSSQLKNTRNPVIDRLMGKESAGIVPNNMRNESYYMATHQDTWSNSMFQAQQQIRS
GSKEAFDCPTVHQVGPESVMIEQDNNSTTENSSNKTRESLTSLLEGVPGFARDQPGRQSM
SEKRHATLDAKSTDTYQKRKKMRDERIRQQLVTQEEQRLKWKKSASVESLHTIGQQYLSD
EEREALKTLYVRANSVRVSRSRGCNESFRQAVDRSYEREPGHVANDDGEDFEIQDDDPKE
QKKKNRNSRLLRNFGNIFRSSGSRKSDNRKSMPPNSDTFLAHTGPSTSSMPLSHSVPDYQ
SYNKSKSGGDLPQAPDFVRPYQNHMPPPPGPDNYDYLPSAMMRPGSRVGIADPGQLSATS
DYDVIQRHLHRSSRHSNSKGYVGGSQFSNTDILWRREQIRSSNHNRSQSNPSRARPKSNF
YEYDLWSAGSHQQLGSNYQQQPQQLQHPPQQPLYNAPIPPKKPTGRAIQNHFNYVATAMT
ANNPYFFNDNTYMMQPPQPYLHPHHPQSVMPSRAHMASHRYVSGSSGIPNRTHLPKMS
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaccatcagtttcaacgggaccaagatcgtggttccttgtggtgatggcaac
atcaccgtgaaggagttcacctccttggccaccacccgctacaaaagggccatcgggaaa
cattatgacgacgactactgggtgtccatctcgtccttgaagagttacgaaggtgggatg
ctggattcggatgatctcatttgtgatgtctgtgatgaccgagagcaactccaggccatc
tttgatgagcaacacgccatgggtggacatggtcatctaggcgatggcatgtgtagctcg
gattcggacaaagaggccaatacgaactcatcggcttcgggatccactgttcgattaggc
tatccaacaaataatatctatcaagagctgcaagtgagacgagggagtgatcccgctttg
aacaaagtggttatcaactctccggccggagatcggccccaaatcactcaccatcacgga
accctcccacctctgccatatttgtacggttccacgaatgagcctcgaagcatgacatcg
gaggagaactacgattctctccccgattcccagaccttcgatagcaagtgctcattacac
gtacttcgccgacgagagcccttgggagcgagtgccaataagcccgataagaacaaggca
ttggaggagtttcccaatgcgagtaatcaccatttggcctcgcacccacccacgggagga
cccgacagagacgaaggaagccttatgagtggaggaagagggagccatcagtcccacacg
ggatatcaaaagcaccaaatggcacggccaagtgtggaggtcatcatcgccaacgaaatt
ggtccgcttggaatccacgtggttccatgtgatgacgatgggcgactcattgtccaggga
attgagccaggaggtcgggtggatcgggacggtcgtttggcggtgggggacgagattgtc
gagatcaacggttacccgctcaccaccgtgtccttcaacaccgctcaagagattttcaaa
gaggctcttttcgctaaggagctccgtgtccaagtgattaaaggcgtatctgatgtgtgt
gccctgagtgatagtgagaacaaagagaacatggatcggaatggaaaagccgacgctcca
cctcctccagccggatccaaagtgacgacggcagttcaagccaataatactcggaagatt
ggcaaagtgttgaaaatcactctgaccaaaggcgcgagtggccttggatttagtattacg
acgcgtgacaatgcaccgggtggacaaacgccgatctacatcaaaaacatcatgcctaaa
ggtgccgctatagaagaaggaacattgaagcctggcgatcgtctcctggaggtcaatggt
acccaagtggatgggatgagtcaatcagatgtggtagccttgctaagaagtgccccaatg
aatgcagagttacaaatcatcgtgtccaggcatggcaccgtctccggtgaagaatctcaa
tctggtacaatgaaactcaagccgaagaccgatccactacccccaattcccgtccaggaa
gagcccgcgggtccaacgagcaacaccttgaacccggagacactatccagacctcgtagt
acatctcccagcaattccacggataactacgaaagctacgactcggagaacaacttccag
ttcccttggaaacagcgcgaaatcctgacctttgacatccctgtccacgacacagaacgt
gccggtttaggcgtgagcgtcaaaggcaagacctcgaccaatcgagatgggagtgtgacc
gatcttgggattttcgtcaaaagtgtcatctacgggggagccgcatctcgcgacggtcga
ttaaaaacgaacgatcaattggtgaatatcaatggtctgtccttactaggcaaggccaat
cctcaggcgatggagacgttgcgaaaggccatgcacgaagaaggacccatgccaggaatc
atcactctcactgtggcccgtagatgtgaaagtgatgatccggactcaaaggttcccgcg
gaaaaggtgaaggacgagcgtcgggactcaatctcaagtcaagtgacgagttcctcagat
gatatcgtgcgacagtacaacgtgtcgccgcccaaattcaagatgccatcttcacaaagc
catccgacggctttgagctctcagttaaagaacacgagaaatccagtgattgatcgactc
atgggtaaagagtcggccggcattgtaccaaataacatgcgcaatgagagctattatatg
gcgactcatcaggatacatggagtaattccatgttccaagctcaacagcagatccgctca
ggctcgaaagaggcttttgattgtcctactgtccaccaagtgggacctgaatcggtcatg
attgaacaagataacaatagcaccacggaaaattcgagcaacaagactcgagagagtctc
acttccctgctagaaggagttcctggatttgcccgggatcaacctggacgacaaagtatg
tccgagaaacgtcacgccactttggatgccaaatcgacggatacctaccagaagcgaaag
aaaatgcgcgatgagaggatcaggcaacagctggtgacacaagaggaacagcgtctgaag
tggaagaaatcggcaagtgtcgaatctttgcacactattggacagcaatatctgtcggac
gaagagcgcgaagctttaaaaaccctctatgtgagagcaaactctgtcagggtctctcgc
agtcgaggttgtaatgaaagttttcgtcaagccgtggatcgcagttatgaaagagagccc
ggccatgttgccaatgacgacggtgaagatttcgagatccaggacgatgatcccaaagag
cagaagaaaaagaaccgaaattctcggctcttgaggaacttcggcaacatatttagatcg
agtggaagtcgcaaaagcgacaatcgcaagtcaatgccacccaactccgacaccttctta
gcccatactggccccagcacgtcctcaatgcccctcagtcattccgttccggattatcag
tcttacaacaagagcaagagtggaggagacttgccacaagcgccggatttcgtccgcccg
taccaaaaccatatgccacctccacctggaccagacaactatgattacctaccaagtgcc
atgatgagaccggggagtcgagttgggattgcggatccaggtcaactttcggccacatcc
gattatgacgtcattcagcgccatctccaccggtccagccgacattccaattcaaaaggt
tatgttggaggaagccaattctctaatacagatatcctgtggcgacgcgagcaaatccgt
agctccaatcataaccggtctcaaagcaatccttcacgggctagacccaagtcaaacttc
tacgagtacgatctctggtcggctggcagccatcagcaattggggtctaattatcaacag
caaccacaacaacttcaacatcctcctcaacagcctttgtacaatgcgccgatcccgccc
aagaaacccactgggcgtgccatccaaaaccacttcaactatgtggccaccgctatgacg
gccaacaacccctatttcttcaatgataacacctacatgatgcaaccaccccaaccctat
ttgcacccgcaccacccgcagtccgtgatgccttctcgagctcacatggcctcccatcga
tacgtgagtggatcttcagggataccgaatcgaacccatttgcccaagatgtcatga
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