Tigriopus californicus (tidepool copepod): 131888691
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Entry
131888691 CDS
T09700
Name
(RefSeq) long-chain-fatty-acid--CoA ligase ACSBG2-like
KO
K15013
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00061
Fatty acid biosynthesis
tcf00071
Fatty acid degradation
tcf01100
Metabolic pathways
tcf01212
Fatty acid metabolism
Module
tcf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
131888691
00071 Fatty acid degradation
131888691
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tcf01004
]
131888691
Enzymes [BR:
tcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
131888691
Lipid biosynthesis proteins [BR:
tcf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
131888691
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
131888691
NCBI-ProteinID:
XP_059093593
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Position
10:6113885..6116567
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AA seq
646 aa
AA seq
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MSSSSSKIFEANTFTATKRDEGVKLHIGDAQPDSQAPITIPELIENAAKEAPDKVAMSVK
RDGIWKSWTYSEYQKEVRSVAKAFIKLGLEPRKAVGIIGFNSPEWFITDLAAVCANGIAT
GIYPTNSIEACKYITNDSKMNIVVVEDQKQLDKFLAVRGELDELKAIVQYMGTPTVEGVL
SWKQLLEMGDQEPDKALNDRLEDIYVNQCCHLVYTSGTTGPPKGVMLSHDNVTYTASVMV
DGFGLRIGHETIVSYLPLSHVAANVTDIFLMITLKGTTYFADKDALKGTLTNTLKEVAPT
LLLGVPRVWEKIHDKMIEIGKANSGLKKTIGTWAKHQGFTHNQNVINNNTNAKSLQYKLA
EKLVFQKVKAALGLQNCEVFYSAAAPLAPDVIEYFMSLDMRIMEIYGMSECSGPQTTNLK
NQQRVGSIGKDIVGFHTKIDPTEGEIRLKGRNIMMGYLGDEEKTEATFDQDGWLKSGDIG
REDQDGFFFITGRLKEILITAGGENVAPILIENAIKKHLPAVSNVMVIGDQRKFLSCVLT
LKVEVDAESMEPLNTLIPPVLEWLESLGSKAKTTIEAADDDTVRRAIQEGINRANEEAIS
NAQRIQKWKLITKDFSIPGGELGPTMKLKRHAVLENYGLLISGIYR
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctcgtcttcaaagatctttgaggccaatactttcactgctaccaagagagat
gagggcgtcaagcttcatatcggagacgcccaaccggatagccaggcacccatcaccata
cccgaactgattgagaatgcggccaaggaggccccggataaggtggctatgtccgtgaaa
cgcgatggcatttggaagagctggacctatagcgagtatcaaaaagaggtccgctcggtg
gccaaggcctttatcaagctcggccttgagcctcgaaaggcggtgggcatcattggcttc
aattctccggagtggtttatcacggatttggctgcagtttgtgccaatggaatcgccacc
gggatctatcccaccaacagcatcgaagcttgcaagtatatcaccaatgactccaagatg
aacatcgtcgtggttgaggatcagaagcagttggacaaattcctggctgtccgaggagag
ctggacgagctcaaagctattgttcaatacatgggtactcctacggtggaaggagttttg
agttggaagcaattgctcgaaatgggtgaccaagaaccggacaaggctttgaacgacaga
ttggaagacatctacgtaaatcagtgttgccatctggtgtacacatctggaaccactggc
ccgcccaaaggggtcatgttatctcatgacaacgtgacgtacacggcatctgtgatggta
gatggttttggtttgaggattggccatgagaccatcgtcagttatttgccgctcagtcat
gtggctgccaatgtgacggatattttcctcatgatcactctcaaaggaaccacctacttt
gcggacaaagatgccttaaaggggacgctcactaataccctgaaagaagtcgctccgacg
ttgttattgggcgtgcccagagtttgggagaagatccacgacaagatgatcgagattggg
aaagccaattcaggcctgaagaaaaccattggcacatgggccaagcaccagggtttcacc
cataaccagaacgtgatcaacaataataccaatgccaaatctcttcagtacaagttggct
gagaagctggtgttccaaaaggttaaagccgcactgggactccagaactgcgaagtcttt
tattctgccgcagctcctctagcccctgatgtcattgaatactttatgagtctggatatg
aggatcatggaaatctacggcatgagcgaatgcagtggtccacaaacgacgaacttgaag
aaccagcaacgcgtcgggagcatcggcaaagacattgtcgggttccacaccaaaatcgat
cccacagagggggagatccgattgaaaggccgcaacattatgatgggatacctgggcgac
gaagagaagaccgaggccaccttcgaccaagacggatggttaaagtccggtgacattggg
agagaagatcaagatggattctttttcatcacgggtcgcttgaaggagatcttgatcacg
gctggcggcgagaatgttgccccaattctcatcgaaaatgctatcaagaagcatctaccc
gccgtgagcaatgttatggtgattggcgatcaacgcaagttcctctcgtgtgtcttgacg
ctgaaggtcgaagtggacgcggagtctatggagcctttgaacacgttgatcccccccgtt
ctggaatggttggagagcttgggcagcaaggccaagaccacgattgaggccgctgatgat
gacacggttcggcgagccattcaagagggcatcaatcgggccaatgaagaggccatttct
aacgctcaacgcatccagaagtggaaactcatcaccaaggacttcagcattcctggtgga
gagctcggtcccaccatgaaactcaaacgccacgccgtccttgagaactacggccttctc
atttcaggcatatatcgataa
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