Tigriopus californicus (tidepool copepod): 131888717
Help
Entry
131888717 CDS
T09700
Name
(RefSeq) nuclear hormone receptor FTZ-F1-like isoform X1
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131888717
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tcf03310
]
131888717
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
131888717
Nuclear receptors [BR:
tcf03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
131888717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Yme1-like_N
Motif
Other DBs
NCBI-GeneID:
131888717
NCBI-ProteinID:
XP_059093621
LinkDB
All DBs
Position
10:complement(13682426..13718668)
Genome browser
AA seq
838 aa
AA seq
DB search
MITSPLHSPPIKDEEVLSPKSSGNALDVAPGPSSNFMLLSPSEGVSSTPSARSNTAVALH
YSTSSHLSSGGISCLGMSGSHNQGPTQSQPQNINSSSSSNNNNNINNNNNISNNNNPPHH
DNNDEHDHRHRICIASSSSSSNSSCCISSHSNLNSITNTTSLTSVLASTSASCNPSISMG
DHLVALDLPIIPASSASNNCPRDFERLGVQIGASLGSPPPIPGVASAVGRVIPPPPLPPA
PSSPLGSPTRQVPIGYLLDGIAAVESPSSSSNRRDSAHSLHLVGTMSSSLGHGSWKDQQS
DETEQSSTSQEDQCWSPNATPSGRATMESDSETGEPGRKASTSRSSSVDGSSEFGGGVGQ
SDQPDTKDGMEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVADRSCVIDK
TQRKRCPYCRFQKCLDVGMKLEAVRHDRMRGGRNKFGPMYKRDRARKLQVLRQRQVLHHH
TGALGGVTLSYGGASGLSNSTANPMYSSQLHIKQEIQIPQVTSMTSSPDSSPSPVQLPHS
ITLASGGGASGSGAGSSSQGGQIIAHHNDPSTGNLQWQISTSPQSGKDFPFVGSSGSGGG
SNGKVPPLIREFLSSLDDKEWQAELYKLLQNQSFNQVEVDLFELLCKVLDHNLFAQVDWA
RNSYYFKELKVDDQMKLLQNSWSEMLILDQIHQRLHNHLPDETTLPNGQKFELLSLALLG
VPSMLDAFQEITNKLNSLKFDSADYVCLKFILLLNPDVRSLSNRSHVQECNEQVNQILLD
YCVNCYANVPDKFTQLLNLLPDLKAMAQRGEDFLYFKHMQGNAPHQTLLMEMLHAKKR
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgatcacatcaccccttcactctcctcctatcaaggatgaggaggtcctctccccaaag
tcgagcgggaatgccctggatgtcgctcctgggccttcgtccaatttcatgctcttgtca
ccgtcagagggtgtcagctccacgccttctgctcgatccaacactgccgttgcccttcat
tattctacatcgtcccatctctccagtggcggaatctcatgtctcgggatgtcgggaagt
cacaaccaaggtccaacccaatcccaaccgcaaaacatcaacagtagcagcagcagtaat
aataacaataatatcaacaataataataatatcagcaacaacaacaacccgccacatcac
gacaataatgatgaacatgatcaccgccacagaatctgcatcgccagcagcagcagcagc
agcaacagtagttgttgcattagcagtcacagtaaccttaatagcattaccaacactacc
agcttgacatctgtcctggcctcaacctcggccagttgcaatccaagtatttccatggga
gatcatctcgttgcgctagatcttccgatcattccagcatcttctgcttctaataattgc
ccacgagattttgaacggcttggtgttcaaattggtgcgtctttggggtctcctccaccc
atcccgggtgtggcctccgccgtgggacgggttatccctccccctcctctgcctcccgcc
ccttctagtcctttgggatcgcccacccggcaagtcccaatcggttaccttctggatggg
atcgctgccgtggagagtccttccagctcatccaatcggagggattccgctcattcactc
catttggtggggaccatgtcgtcctcacttggacatggatcttggaaagatcaacagtca
gatgaaacggagcaaagctctaccagtcaagaggatcaatgctggtctccgaatgccaca
ccctctgggcgggccacgatggaatccgatagtgaaaccggggaaccaggtcggaaagcc
tctacaagtcgaagtagctccgttgacggctcgtcagagttcggtggtggagtgggacaa
tccgaccagcccgacaccaaggatggcatggaggagctctgtcccgtttgtggtgacaaa
gtgagtggttatcactacggactcttgacctgtgagagctgcaaaggcttcttcaagcgc
acggttcagaacaagaaagtctacacgtgtgtggccgacagaagttgtgtgatcgacaag
acccagcgaaagaggtgcccctattgcagattccaaaagtgtctcgacgtcggaatgaag
ctcgaagccgtgcggcacgatcgaatgcgtggcgggcgcaacaaatttggacccatgtac
aaacgagaccgggctcgaaagctccaggtcctacggcagcgtcaagtgctccatcaccac
acaggtgctctagggggagtgacgctgtcctatggaggggcgtccggtctcagcaactct
actgccaatcccatgtactcctctcaactccacataaagcaagagatccagataccacag
gtgacctcgatgacctcctcacccgactcgtcgccgtcccccgttcagcttcctcacagc
atcaccctagcgagtggaggtggagcctcggggagtggggcgggctcatcgtcacagggt
ggccagatcattgctcaccacaacgatccgagtacggggaacttgcaatggcagatcagt
acttcaccccaatcaggaaaggacttcccattcgtcgggtcgtcgggttcgggcggagga
agcaacggaaaagtgccgcccctgatccgggaattcctctcgtctttggatgacaaagag
tggcaagccgaactgtacaagctgctccagaaccaatcgttcaaccaagttgaggtcgat
ctctttgagctgttatgcaaagttcttgatcacaatcttttcgcgcaagtggactgggcc
aggaattcgtattacttcaaggagctaaaggtggatgatcagatgaaactgctccaaaac
tcttggtcagaaatgttaattctggaccaaatccaccaacgccttcacaaccatctaccc
gacgagaccaccttacccaatggtcaaaagttcgagctcctttcccttgccctcctggga
gtgccatctatgttggatgccttccaagaaatcaccaacaaactcaacagcctcaagttc
gatagtgcagactatgtgtgtctgaagttcattttactattgaatcctgatgtccgaagc
ctgagtaacaggagccatgtacaagaatgtaacgaacaagtcaaccaaatcctcctcgat
tattgcgtcaattgctacgcaaatgttccggataaattcactcagttactgaaccttcta
cccgacctgaaagccatggcccaacgaggagaggactttttgtatttcaaacacatgcaa
ggcaacgcgccccaccaaacgttactcatggaaatgttacacgccaaaaaacgataa
DBGET
integrated database retrieval system
