Tigriopus californicus (tidepool copepod): 131888722
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Entry
131888722 CDS
T09700
Name
(RefSeq) ileal sodium/bile acid cotransporter-like
KO
K14343
solute carrier family 10 (sodium/bile acid cotransporter), member 3/5
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131888722
Transporters [BR:
tcf02000
]
Solute carrier family (SLC)
SLC10: Sodium bile salt cotransporter
131888722
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SBF
TIR_3
Motif
Other DBs
NCBI-GeneID:
131888722
NCBI-ProteinID:
XP_059093627
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Position
10:complement(13666970..13670597)
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AA seq
525 aa
AA seq
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MCPLYPLHMVFLYLCLIVPLFFAVVQGSEELFAGWNLKFHPGSVEKLLQFNSTQIEIACE
GCHLNPDIKRVFPNLELVVSSQDDFVASVSGSSDLEIQPEAVVNPLNQEKEVVFNLERFG
LEAQTNWSVAFNLSANFLGFTSIRAKVRDGGNKLTLPAMTKTVEMDLSVVRKKTIQSKLF
GYSVALLISIAYINMGCALDLSVVKESLKRPVGPAIGFLCQFMIMPLISFFLGYSFYDDI
PMRLGLFVTGVSPGGGASNIWTLMFGGNLNLSVTMTAISTFAALFMMPLWLFTLGRVIFS
DGNIIIPYHKIFTYAFCVVVPLSIGLLISRYLPRVSKFLVRILKPMALFLIMFILIFGVW
ANFYMFKLMTWKVWLTGMGLPWLGFAFGCSIARLTRRPVEDVIAIAIETGVQNTGISIFI
LWFTFEHPLGDIAAVVPVAAATMTPFPLLAALIMVKAKHWMGIQAKDEPTCPFNLQNLEE
EAAAVAGGHKDIFKGSESNQKLMCSYQDEDEENDDVQKQVISEKA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcctttgtacccgctccacatggtattcctatacctgtgtctgattgtgcccttg
ttcttcgccgtggtccaagggtccgaggagctctttgcgggttggaatctcaagttccat
ccaggttctgtagagaagctccttcagttcaactcgacccaaatcgagatcgcttgtgag
ggatgtcacttgaatccggatatcaagcgggtgttcccgaatttagaactggtcgtgagc
tcacaggatgactttgtggcctcggtcagtggttcgagtgacttggagatccaaccggag
gccgtggttaatcctctcaatcaagagaaagaggtcgtgttcaacttggagaggttcgga
ttggaggctcaaaccaattggagtgtggcttttaacctgtcggccaacttcttgggtttc
acgtccatcagagccaaggtccgcgatggaggcaacaagctcaccttgcccgccatgacc
aagaccgtggagatggacttgtcggtggtgcgcaagaaaacgatccaatccaaattgttt
ggctattcggttgccttgctcatctccatcgcttacatcaacatgggttgtgctcttgac
ttgagtgtggtcaaggagtcgctcaaaaggcccgtgggtccggccattggcttcttgtgt
caattcatgatcatgccattgatctcgttcttcttgggctactcgttttacgacgatatc
ccgatgcgattgggcttgttcgtgaccggtgtgtcgcctggaggtggagcctcaaacatc
tggaccttgatgtttggtggcaacttgaacctatcggtgaccatgacggccatctcgacc
tttgccgcccttttcatgatgcctctgtggctgttcactttgggtcgagtcatcttttcg
gacgggaatatcatcattccgtaccacaagatctttacctacgcgttttgtgtggtcgtt
cctttgagtattggtctgctgatatccaggtacttgccccgtgtgtccaagttcttggta
cgaatcctgaagcccatggccctcttcctcatcatgttcatcctgatctttggcgtgtgg
gccaatttctacatgttcaagttgatgacctggaaagtgtggctcaccgggatgggtttg
ccgtggttgggatttgcctttggctgctcaatcgcccgactcacccgcagacctgtggaa
gatgtcatcgctattgccattgaaaccggagtacagaatacgggcatttccatctttatt
ctgtggttcacttttgaacatcctttgggagacattgcggccgttgttccagtagccgcc
gccactatgactccattcccgctcttggccgccttgatcatggtgaaggccaagcattgg
atgggcatccaagccaaggacgagcccacgtgtccgttcaatctgcagaatctcgaggaa
gaggccgcggccgttgccggaggtcacaaagatatcttcaagggcagtgagtccaatcag
aagctcatgtgctcctatcaagatgaggatgaagagaacgatgatgtgcagaagcaggtc
atatcggagaaggcttaa
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