Tigriopus californicus (tidepool copepod): 131888753
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Entry
131888753 CDS
T09700
Name
(RefSeq) mutS protein homolog 4-like isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcf03036
]
131888753
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Meiosis-specific proteins
Others
131888753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
C2c1_RuvC-like
AAA_29
AAA_14
Motif
Other DBs
NCBI-GeneID:
131888753
NCBI-ProteinID:
XP_059093662
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All DBs
Position
10:11818315..11821743
Genome browser
AA seq
932 aa
AA seq
DB search
METLEEAKSEGDFSLTQSRYFSRKGRAEILPSESGCISGLHPLSQTETEVNNSIAYFENP
NSLNLCVSTEVEPFQFQMPQRPRIEQRSVKASSCISSIPRVLQTPVRGSVSTAQYKTPKT
PGSTANSYSQYGRGDQDSTFQSCCIVAVLEGRGGARGEVGLAVIALDNPTLVLCQFSDSR
TYTRTLTKLELFRPMEILIPLTGSFDPKAVSKLNQEIAECFPRAKITPLQRRYFSEVNGL
QMVRNLCVPEYATVELQIKDKYYSLAAASALIKFVEHSQNTVYAPKSLKVEFQASSNTTM
IDAETIKHVELLTPMINSKSNLTLFGILHRCSTPGGIRHLRANLFQPPALVDVINARLDA
IEELIANPGMFHSLQSVVSRFCDMDQLLSLCVIVPKTETLATFEQRLNNVIGLKHALELV
EPLHSVLEGAESKLLNDIYNSLEDLRFQYIMERVCEIIQDDAKVQRGSAAMKLQRCFAIR
NGVNGLLDVARRTYCEIVDDIEGMVVQLAEEFEIPLRVGFNASKGYHVQLATGGKKVNPI
QLKNLPKSFLRPQQTKNMISFTTEEIIQADQRSQESLREITFMSNTIIQELLGEVRDAIG
SLYKLGEAVCSLDLLLALTEVSMKDDYSRPQFGNSTVIKQGRHPILDSMERKEVVANDTT
ATIESRFHVLTGANMSGKSTYLKQIILLQIMAQMGSFVPANFASFRIADTIMSRIGTGDS
IESNASTFMLEMREMAYILTTVGSTSLIVMDELGRGTSTEEGTSLCWAISEELVKSTAFC
FLATHFPLMTKLEAMYCTAVSHHFLTQDRKNNSGDTIGLIYSYKLAKGTSQVHNYGINLV
KATRTFSDDVILRAEEIAQELSMSKRVLPEPGPDEVRRMNSVKLVLRLMLIAKNDSLDLD
SKIAHAKSLQQQFEESESEGEDCESNHISNEF
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcttgaggaggcaaaatcagaaggagattttagcctgacacaatctagatat
ttctctaggaaaggccgtgcggaaatcttaccatccgaatcaggatgcatttctggtctt
catccgctttcgcagactgaaacggaagtgaacaattctatcgcatattttgaaaatccg
aactctctcaacctctgcgtttccacggaagtggaaccatttcaatttcaaatgccacaa
cgacctcgaattgagcagagatctgtgaaagcatcctcgtgtatttcttcaatccctcga
gttcttcaaaccccagttcgaggatctgtttcaactgctcaatacaaaactcccaaaacc
ccgggatcaaccgctaactcttattcgcaatacggcagaggagatcaggattcgactttc
caatcatgttgcattgtggcagttctggaggggcggggaggggctcgcggagaagtgggt
ctggctgttattgccttggataatcctactttggtattgtgtcaattctctgattcaaga
acatatacacgtaccttaaccaaattggaacttttccgacctatggaaatcctgattcca
cttactggaagttttgacccaaaagcagtttccaagttaaatcaagagattgcggaatgc
tttccaagggcaaaaataacacctctccaaagacgatatttcagcgaggtcaatggcctg
cagatggtgaggaacctttgtgtccctgagtacgccacagtggagcttcaaattaaggac
aaatactatagcttagcagcggcctcggcgttgattaagtttgttgagcattcacaaaat
accgtttatgctcccaaatcgcttaaagtggagtttcaagcttcatctaatacaacgatg
attgacgcagaaacgatcaaacatgtggagcttctcacaccaatgatcaattccaagtca
aatcttacgttgtttggcatccttcaccgttgttcaacaccaggtggaattcgacatctt
agagctaatttattccaacctccggctttggttgacgtgataaatgctagattagatgca
attgaggagctcatcgccaatccgggcatgtttcattcgcttcaatcggtggttagccgg
ttttgcgacatggaccaattactctcgctgtgtgttattgtacccaaaactgaaactttg
gcaacgtttgaacaaagattgaacaatgtcatcggcctcaagcatgctttagaacttgtg
gagcctctacactctgtcttggaaggagcagaaagcaaactcttgaacgatatctacaat
tcccttgaggacttacgtttccaatatatcatggaaagggtttgtgaaatcatccaagac
gatgccaaagtccaacgtggttccgcggctatgaagcttcagaggtgttttgcaatccga
aatggtgtcaatggtttattggacgtggcccggagaacctactgtgagattgttgatgat
atcgagggtatggtggttcaattagctgaggaatttgaaatccctcttagggttggattt
aatgcctcaaaaggctaccacgttcaacttgctaccggaggaaagaaagtcaatcctatc
caactcaaaaacctcccgaagtcattccttagacctcaacaaacaaaaaacatgatatct
ttcacaaccgaggaaatcattcaagctgatcaaagaagccaagaatctcttcgcgagatc
acttttatgagcaacactatcattcaggagctcttaggagaggtcagagatgccatcggc
agcttgtacaaacttggagaggcagtttgctcattggatcttttacttgctcttactgag
gtgtccatgaaggacgattattcgaggccacaatttggaaactcgaccgtgatcaaacaa
ggccgtcatcctattttggacagcatggagaggaaagaagtcgtggccaatgacaccacc
gccacgattgagtcacgatttcatgttttaactggagcaaatatgagtggaaaaagcacc
tacctgaagcaaataattctcctgcagatcatggcacagatgggcagttttgttccagca
aattttgcttcgttccggattgccgatacgattatgtcgcgtattggaacgggcgattcg
atagagagtaacgcctcgaccttcatgttggaaatgagggaaatggcgtatattctaacg
acggtgggttcaacctctttgattgttatggatgagttgggcagaggaacttctaccgaa
gaagggaccagtctctgttgggcaatttcagaggaactcgtaaagtctacagccttttgc
tttcttgccactcattttccactgatgacaaaactggaggcaatgtattgtactgctgtg
agtcatcacttccttacccaagatagaaaaaacaattctggagacaccattggcttgatc
tatagctacaaattagccaaaggaacgtcacaggtccataactacggaatcaatctagtc
aaggctactcgcacattttctgacgacgtcattctgagagctgaagaaattgcccaagaa
ttgtccatgtccaaaagagttcttccggaacctgggccagatgaggtcaggcgaatgaac
tcggtgaaattagtgttaaggctaatgcttatcgctaaaaacgactcgttggatcttgac
agcaaaatagcccacgcaaaaagcctccagcaacaattcgaagaatcagagagcgaaggc
gaggattgtgaatcgaatcatatttctaacgagttttag
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