Tigriopus californicus (tidepool copepod): 131888775
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Entry
131888775 CDS
T09700
Name
(RefSeq) chitin synthase chs-2-like
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00520
Amino sugar and nucleotide sugar metabolism
tcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
131888775
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tcf01003
]
131888775
Enzymes [BR:
tcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
131888775
Glycosyltransferases [BR:
tcf01003
]
Polysaccharide
Structural polysaccharide
131888775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
ChitinSynthase_IV_N
Glyco_trans_2_3
Glyco_tranf_2_3
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
131888775
NCBI-ProteinID:
XP_059093688
LinkDB
All DBs
Position
10:1902689..1908341
Genome browser
AA seq
1452 aa
AA seq
DB search
MSSASIEGHENPGFDIDKDDSLVLAPEPRRRVEFQTQESEYHFTPKKEVLKGWDAFIQSE
DESKSASDKNTGLIKKASIVLKILTIIVVFGVVLIGALVSKGSLMFMLAQASYRQSTVVT
CTYNITNDNGTIQSDPENNVAWLWCIFFSFLGPELLTFLKCVRVCIMRTVARPKWDAFLI
VFLMETLHVIGLAFLFFAALPGLDSIKALMLTSCIAFIPGLLMLLNWNIWAKSWQRYVII
TLNALSFLLQASGLIAWPVANIEWAGKPMEISNSWALAVGILLTSFGWWESFVTQESSFI
VAKFLWGIKTDMFELHTRFFTYLFTSVWKIFLFFILFIVFPVTFGNIPNSGFLFDHFHSS
FATSNFTVDTGDEISSELVSYHFPVKVLATQLFCGYATYVFGKFACKVNIQRIAFALPLT
LVMPVSITTLCLMCKARNDDHCAFSNDWGAFSFFQCPENATGNQFVQELGWIWILWALSN
MWIVNHIWFPKSQRLASTEQMFGVPWYCGLLVDQSLMANRRSDKGRARMRLDAKGQKVNH
AVSYDGHPDDEEKQKKRRAFALPSREVVAQLNPEDQITRIKGCATMWHESPEEICEMLKS
IFRIDEDYSARQMVKQLELKDPDYYEWETHIFFDDCMEPTDDRKHSQVNQFVRLLLDQVD
IQGKKWYGTRNLKVPPPAKYTTPYGGRLEWVLPGQTKIICHLKDKNKIRHKKRWSQCMYM
YYFLGFQLMDNPKLTAAQKDCRAMNTYLLALDGDVDFQPDAIIKLVDLMKRNPDVGASCG
RIHPTGSGYMQWYQMFEYAIGHWLQKATEHVMGCVLCSPGCFSLFRGKAVMAENVMRTYT
TVATEPKHFVQYDQGEDRWLCTLLLQQGWRVEYSAASDSFTACPEGFKEFYNQRRRWMPS
TLANIIDLLGDWRRVIRNNDDISIFYIIYQVMMMIGTILGPGSIFLMLVGACGAAFGLSN
WASFGINLAPMVIFILACLLTKSDTQIIVAQVLSIAYALVMMAVLVGLLLEIKESGWLAP
TTLSFIFVAGVFILAAFLHPQEFWCLPMGLIYYITIPSMYLFLVIYSFFNLNVVSWGTRE
VVQKLSAEEMEEAKKKAEEQAKKPPAKKSGFMSFFQRDRLLEFSLTKMFTDKNGVKSQLE
NMQEKLEKIEMALEREGYPLPEKPEEEAEIEKETTTIRKPIVRIMEPPRDEMKNPFWIEQ
DCLSTSKRKYLPNNEITFWHEVIEKYLKPLDKNPEKEEQIALGLKELRNQVVFSFLMINS
IWVLTVFLLQQNKEQLFIQWPFGDDLQLEPLGLLFVIFFAFVLFVQLVGMLLHRIMTLGH
IVSSTKIKVSIKSMLGKKETQFDGDKFLQRNAVEMFKNLQSTYMPESDSQNKNLESVLEM
AMDQVAQGHDDSVRRASNMSQGKANLLRRAETIKALKRRQTTRRQSMKPTMRPQRHESSR
PDSSSSDSHEEI
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggcttccattgaaggccatgagaacccgggcttcgatatcgacaaggacgac
tctttggtgttggcgccggaacctcgtcgaagggtggaattccagactcaggagtccgaa
tatcacttcacgcccaagaaagaggtgctcaaaggttgggatgcttttattcagagcgag
gatgaaagcaaatccgcttccgataagaacactggtctcatcaagaaggcgtcgatcgtg
ctcaaaatcctgaccattatcgtcgtgtttggggtggttctcattggagcactggtgtcc
aaaggatcattgatgttcatgcttgctcaagcaagctatagacaaagtacggtggtgact
tgcacctacaacattactaatgataacggtaccatccaatctgatcctgaaaacaatgtg
gcatggctgtggtgcatcttcttttcctttttgggccctgagttgttgacttttctgaaa
tgcgttcgagtgtgcataatgcggaccgtggcacgacccaaatgggacgcgttcctcatt
gtgttcttgatggaaacattacacgttatcggattggcctttttgttctttgcggctctg
cctggactggattcgatcaaagctctcatgttgaccagctgtatagctttcattcctggg
ctgttaatgctcctcaattggaatatttgggccaagtcgtggcagagatatgtaatcatt
acccttaacgccttaagcttccttttgcaagccagtggattgattgcttggccagtggcc
aatattgaatgggcggggaagcccatggaaataagcaattcttgggcccttgccgttggg
attttattgacatcgtttggatggtgggagagctttgtgacccaagagtcgtcgttcatt
gtggccaaattcctatgggggatcaaaaccgacatgttcgagttgcacacacgcttcttc
acatatttgttcacatcagtgtggaagatcttcctgtttttcattttgttcattgtgttc
cccgtgacctttggtaacattccaaactctggtttcctcttcgatcatttccattcctca
tttgctacatccaactttacagtggataccggagacgagatcagttccgagctcgtcagc
tatcacttccctgtaaaggttttggcaactcaattattctgcggttacgccacgtacgtt
tttggcaagtttgcctgcaaagtgaacattcaacgcatagcctttgctcttccattaacc
ttggtgatgcctgtgtccatcacaacgttgtgtctaatgtgcaaggcacgcaacgatgat
cattgtgccttctctaatgattggggcgcgttttctttcttccaatgccctgaaaatgca
actgggaatcaatttgtacaggagctaggatggatttggatcctctgggccttgtccaac
atgtggatcgtgaatcatatttggtttcccaaaagtcaacgtttagcttccactgagcaa
atgttcggcgttccctggtattgtggactattggtggaccaatcccttatggccaatcga
agaagcgataaaggtcgtgctcgcatgagattggacgccaaaggtcaaaaggtcaatcac
gctgttagctatgatggtcatcccgatgatgaagaaaaacagaagaaaagaagagccttt
gcgctaccttcaagagaagttgtagctcaattgaatccggaagatcagattacaagaata
aaaggatgtgccaccatgtggcacgaatcccccgaagagatttgcgagatgctgaagtct
atcttcaggattgacgaggactacagcgccaggcaaatggttaagcagcttgaattgaag
gaccccgattactatgaatgggaaacccatatattttttgacgattgtatggaacccacg
gacgaccgtaaacactctcaggtcaatcagtttgtgagactattgctggatcaggtggat
attcagggcaagaaatggtatggcaccaggaatttgaaagttccaccaccagccaaatat
accacaccttatggcggacgtttggaatgggtattgcctggtcagaccaagatcatttgc
cacctgaaggacaaaaataagatccggcataagaagagatggagccagtgcatgtacatg
tactacttcttgggttttcaactcatggacaacccaaaactgacggcggcccagaaggat
tgccgagccatgaacacctatttgctggccttggacggagacgtcgatttccagcctgat
gcgatcatcaagctcgtggatttgatgaaaagaaacccagatgtgggagccagctgtggc
cgaattcatcccaccggctctggatatatgcaatggtatcaaatgtttgaatacgccatc
gggcattggcttcaaaaggcaacggagcacgttatgggttgcgtactctgcagtccaggt
tgcttctctttgttccgaggcaaggctgtgatggctgagaatgtcatgaggacttacacc
accgtggccacggagcctaagcactttgtccaatatgatcagggcgaggatcgctggctt
tgcaccttactactccagcagggctggcgggttgagtattcggccgccagcgactccttt
acagcttgtcccgagggtttcaaagagttttataaccaaagacgacgatggatgccctcc
actttggccaatattatcgacctcctaggcgattggcgccgagtgatccgcaataacgat
gatatttccattttttatatcatttatcaagtcatgatgatgattggtaccattctaggc
ccagggtccatatttctcatgttggttggagcttgtggtgcagcatttggtttgtcgaac
tgggcttcctttggaatcaatttggctcctatggtcatcttcattttggcttgtctcctg
acaaagtcggacacccaaatcattgtggctcaagtgttgagcatagcctacgccttggtc
atgatggcagttctggttgggcttcttcttgagatcaaagaatccggttggttggctccc
accaccttatccttcatatttgtcgcgggggtattcattttggcggccttcttgcatcct
caagaattttggtgtctgcccatgggtctcatttattacatcaccatcccatcgatgtac
ctgttccttgttatctattccttcttcaacctcaacgttgtttcatggggtaccagagag
gtggttcagaaattgagtgccgaagaaatggaagaggccaagaaaaaggcagaagaacag
gccaagaaaccccctgccaagaagtctgggtttatgtcattcttccagagagaccgcctt
ttggagttttctttaacaaaaatgttcacagacaagaacggagtgaaaagccaattggag
aatatgcaagaaaaactggaaaaaattgaaatggctttggaacgagaaggatatccattg
ccagagaagcctgaagaggaagcagaaatagagaaggaaacgaccacaatccggaagccc
attgtccgcatcatggaaccaccacgtgatgagatgaaaaaccctttttggattgaacaa
gactgcctgagcacaagtaagagaaaatatcttccaaataacgaaatcacgttttggcac
gaggtgattgaaaaatacctaaaacctttggacaagaacccggaaaaggaagaacaaatt
gcgctgggcctgaaggaattgcgaaatcaagtggtcttttccttcctgatgatcaactct
atttgggtcttaaccgtgtttttgcttcaacagaacaaggaacaactcttcatccaatgg
ccattcggagacgatctgcaactcgagccacttggccttcttttcgtgatattttttgct
ttcgtcctcttcgttcaacttgttggtatgctcttgcacagaattatgaccttgggtcac
attgtgtcctcgaccaaaatcaaagtgtccatcaaatccatgcttgggaagaaggaaacg
caatttgatggagacaaattcctccagcggaacgccgtggaaatgttcaaaaacctacaa
agtacctacatgcctgaatcagactcacagaataaaaatcttgagagcgtgcttgagatg
gccatggatcaggtagctcaaggacatgatgatagcgtccgaagagcctcaaatatgtcc
caaggaaaagccaatcttctacgacgggctgagacaatcaaagccctgaaacggagacaa
accacgagacgccaatcgatgaagcccacaatgcgacctcaaagacacgaatcgagtcgc
cccgatagttcctcatcggactctcatgaagagatctag
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integrated database retrieval system
