Tigriopus californicus (tidepool copepod): 131888856
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Entry
131888856 CDS
T09700
Name
(RefSeq) general transcription factor 3C polypeptide 3-like
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcf03021
]
131888856
Transcription machinery [BR:
tcf03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
131888856
TFIIIC, fungi type
131888856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_8
TPR_14
TPR_2
TPR_16
TPR_19
TPR_1
TPR_17
TPR_CcmH_CycH
TPR_6
TPR_11
TPR_12
ANAPC3
TPR_7
TPR_21
TPR_15
ARM_TT21
ChAPs
BTAD
HAT_Syf1_CNRKL1_C
Motif
Other DBs
NCBI-GeneID:
131888856
NCBI-ProteinID:
XP_059093782
LinkDB
All DBs
Position
10:complement(11863664..11872871)
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AA seq
925 aa
AA seq
DB search
MAVPSGSGMTFLLNSPLENEEDNSIMMEDLIDENNDEADNGDDPRQFLAQALVSDRNEIE
PEPIPSTSQGGENPEEGDVDMVHAKRERELTDKYLTGQLSFRDFVKEMSLESEDEEAIEE
EEGDSDLSDSSDLDWTPSKKLKTEAKAKKKIDVDEPVEEENDEEDHHGHFESEFNESQRQ
QLSRKGRKVGTKNIRRKRLDPALQGLMGEANLRFVRGDRETAIRMCMEVIRQDPTAPEPY
QTLSNVYEEGGEQEKSLQFALIAAHLAPQDAEEWARLADMSLEMGDRNQAISCYRKAIDA
DLENTRYHLARCSLLEQSGEIRSAIRGYKRLIAVLKEDQSQDFINASKELARLLHVKENF
EAAKDVIYEAVKKYPSIVTSEELNLLLELLISLNQNDEALEVLCKYCSTQFSSDVSQEEL
DDLSPEKQLEAFSIVIMPEGTPLDIKAKLVIVLVNLKATHLVKVSCKEIMASDPEEFGEI
FLDIAEVLMTNQHFDQSLPFLEKLVKSESYAQPAVWLKYGESLFETNSLAEAELAYQKVV
ESAPQHHEARRTLSSILHKLGRADEALFTLTQDEDVDLLNPTLLYEKCQLLWSEGCFEEF
VVKAKLLLSRHFVQIRNKEELHAIASAKKLASKNKALSEVRAYRREPLIRDSGPSFESGT
QISMEDEYLLFRKLCDYLYEQKRFEALQKVSFSAMGSPYFNKKPDIVKECEFLCLISSFL
NGDSYHAYNLVRELVTKDIKNPRIWNLFNLVIMRADDVRHNRFLMRLMSRNPDNIALGIL
NGHNCLVAGTYKYSLGEYMSAFKQERDNPMVALMLGLTFTHMACQKFSAKKHSLVVQSCA
FLHKYLQLRGVCQESYYNLGRAMHQLGLLPAALFYYKKALSLPPAVENDYKFNLCREIAF
NLSLIYRNSGANDLAAMYLQKYVVV
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcccagtgggagtggcatgacgtttttactcaattcacctctcgaaaatgaa
gaggacaactcaatcatgatggaagatttgatcgatgaaaacaacgatgaggcggacaat
ggggatgaccctcgacagtttctggctcaagctttggtctcggatcgtaatgagattgaa
cccgaaccaattcctagcacgagtcaaggtggagagaacccggaggagggtgatgtggac
atggttcatgccaaacgggagcgcgaactcacggacaagtatctcacgggccaacttagc
ttccgtgattttgttaaggaaatgagccttgagagtgaggatgaagaagccattgaggag
gaagagggagattcggacttgagcgattctagtgatctcgactggaccccgtccaaaaaa
ttaaaaacggaggccaaagccaagaagaagattgatgtggacgagcctgtggaagaggaa
aacgatgaagaggaccatcatggccattttgaatccgagttcaatgaaagccaaaggcaa
caactaagtcgcaaaggacggaaagtgggcacgaaaaatattcgtcgaaaacgtctcgat
cccgcattgcagggattgatgggtgaagcaaacttacgatttgtccgcggcgatcgcgaa
actgccatacgaatgtgtatggaggtaatccggcaagatccaaccgcccccgaaccatat
caaacgttatccaatgtttatgaggaaggaggcgaacaagagaaatcacttcaattcgca
ttgattgccgctcacctcgcacctcaagatgccgaggaatgggcacgattagccgatatg
tcgctcgagatgggcgatagaaaccaggctatttcttgctacagaaaagctatcgatgcg
gatttggaaaacactcgttatcatttggcacgatgtagcttattggaacaaagtggggag
attcgatcagccattcgaggctataaacggttgattgcagttttgaaagaagatcaaagt
caagactttattaatgcttcgaaagaattagctcggctgctccacgtcaaagaaaatttc
gaggcggctaaagatgtgatttatgaggcggtgaagaagtatcccagcattgtcacttcc
gaagagctgaatctgttgcttgagttgctaatttccttgaaccaaaatgatgaggctttg
gaggttctctgtaagtattgttccacccaattctcctcggatgtgtcccaagaggaattg
gatgatctgtcacccgaaaaacaattggaagccttctctatcgtcatcatgcccgagggt
accccattggacatcaaggccaaactggttattgtgctggtcaacctgaaagctacccac
ttggtcaaggtatcatgcaaggaaatcatggcgagtgatcccgaggaatttggcgagatc
tttttggatatcgctgaagttctaatgactaaccagcatttcgatcagtccctgccattc
ttggagaagctcgtcaagtcggagagttatgctcagccggccgtttggctaaaatatgga
gagagcctctttgaaaccaattctttggccgaggctgagctcgcctatcagaaagtggtc
gaatctgctcctcaacatcacgaggctagacggacactatcgagtatcttgcacaaactc
ggtcgtgcagatgaggccttgttcaccctgactcaagacgaggacgttgacttgctcaat
cccacactactctacgagaaatgtcaactactgtggagcgaaggctgttttgaggaattc
gtagtgaaggccaaactgttgttgagtcggcatttcgtacagatccgcaacaaagaagag
ctgcatgctattgcttccgcaaaaaagttggcgagtaagaacaaagccctatcagaggtg
cgggcctaccgacgagagcctttgattcgagattctgggccgtctttcgagtctgggact
cagatctcgatggaagatgaatatcttttgtttcgcaaactctgtgattatctttacgag
caaaagcgctttgaagccctgcaaaaggtttccttctcggccatgggctcgccatacttc
aataaaaaacctgacatagtgaaggagtgtgagttcctttgtctcatttcttccttcctc
aatggagattcgtatcatgcctacaatttggttcgagaactcgtcaccaaggatatcaaa
aacccgcggatctggaacttgttcaacctagtcatcatgcgggctgacgatgtccgacat
aatcgtttcctaatgcggctaatgtcaagaaatccggataatatcgctcttggaattctt
aacggacacaattgcctggtggccgggacttataagtattcgttgggcgagtacatgtct
gcgttcaaacaagagcgggacaacccaatggtggctctcatgttaggcctcacatttacc
cacatggcctgtcagaagttctccgccaagaaacacagtcttgtggtccagtcttgtgct
tttcttcataaatatttgcaactgcgtggagtttgccaggaatcatattacaacttaggc
cgggccatgcaccaactcggtcttctacctgcagcgttattctactacaaaaaggcttta
tccttgcctccggccgtcgagaatgattacaagttcaacttgtgtcgagaaattgcattc
aacttgtcgcttatatatcggaactctggtgcgaacgatttggccgccatgtatcttcag
aaatatgttgttgtctaa
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