Tigriopus californicus (tidepool copepod): 131888978
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Entry
131888978 CDS
T09700
Name
(RefSeq) protein pangolin, isoforms A/H/I/S-like isoform X1
KO
K04491
transcription factor 7-like 2
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
131888978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131888978
Transcription factors [BR:
tcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
131888978
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
131888978
NCBI-ProteinID:
XP_059093933
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All DBs
Position
10:5754297..5767259
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AA seq
649 aa
AA seq
DB search
MATTARAPQRATSSSSQAAVPQSTSFHPHLGSRQASPTSAQVEASRTTALKNSAVNSSGT
TLKSNKIPTSSQDPGGLSALKRDRFLSVANGITLDDFGCSNDELRIFTEEGEDEERELAL
NEELQAALLEDKTCLIRETELGIKQERLLRIDPGHPDPSSPSSPYPNGYPLLSPFSSSPF
SNTNGHSQTPGSQSMVRSSGSPLSPSFLYNDSLGSPPPAHMGGIPYSLADPGLRSLYSMP
PHSSSYPYPLIPSDVSGQFSSWAPCSVSPPSSPTSPFYAFVAASARVAVSAANLCSQSPD
SVGERYSGLSRFGTPNSLLSPANSGYHSRSPSSMFSGSDGKSGTLKSRGRGASAKEKEAH
IKKPLNAFMLYMKEMRPKIVAECTLKESAAINQILGRRWHGLSRDEQAKYYELARKERQL
HMQLYPGWSARDNYAQSKKKKRKRMQEKGPESQDLVLGGKKFRGKYGLIEHSDSWCKPCH
SNGDDMSRDFLPGSSNYISSLSPCGDGLLMTNANDSAACSAAIAAASIMDMHLNSVPCSA
AQLIHNNNVASSSGSNILTMDSILLTSPAGSHGPAGNLCNPSPPMLSLGPHSHLSGHHSL
PPSSHGDGGGNLNFPPLNHHELMSLEQQKMVLSPEGAGANDQSPKYISL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaactgccagagccccccagcgtgccacctcttcatcttcacaagccgcagtt
cctcaatccacctcattccatccacaccttggttccaggcaggcctcgccaacttccgca
caggttgaggcctcaaggaccacggctctcaagaacagtgcagtgaactccagtggaacc
acgctcaagtccaacaagattcccacgtccagtcaggatccaggtggcttgagtgctctg
aaaagggatcgattcttatccgtggccaatgggatcacccttgacgatttcgggtgctcc
aatgatgaattgcggatcttcaccgaggagggcgaggacgaggaacgagaattggctttg
aatgaggagctccaagcggctctactcgaggacaaaacgtgcctcatccgagaaaccgaa
ctaggcatcaagcaagagcgattacttcgaattgatccaggtcatccggacccctcatcc
ccgagttcaccctatcccaatggatatcctctgctctcgccattctcatcgtcaccattt
tccaacaccaatggccactcacaaaccccgggatcacaatctatggttcgatcgagtgga
tcaccgttgtccccatcgtttttatacaatgactcgttagggagtcctccgccagcccat
atgggtggcataccctacagtttggcagatccaggtttgcggtcgttgtactcgatgcct
ccacattcctcatcgtatccatatccgctaattccttctgatgtctcggggcaattttca
tcatgggctccatgttccgtttccccaccgtcttctcccacatctccattttacgctttt
gttgctgcctcggcgcgggtggctgtttcagcggccaatttatgttcacaatcacccgac
tctgttggggaaaggtactccggtctctcacgatttggcactcccaatagcttgttaagt
ccggccaattccggatatcactctcgctctccgtcgtccatgttttccggatccgacgga
aaaagcggaaccctgaaatcacgaggtcgcggtgcttcagccaaggagaaagaggcccac
atcaaaaagcctttgaatgcatttatgttgtacatgaaagagatgaggcccaagatcgtg
gccgaatgcaccctaaaggagtcagcggccatcaaccaaattttaggacggaggtggcac
ggtttgagtcgtgatgagcaagccaagtattatgagctcgcccgcaaggagcggcaactc
catatgcaactatatcctggatggtccgccagggacaactatgctcaaagcaaaaagaaa
aagcggaaaagaatgcaagaaaagggtccagaatcccaagatctagttttaggggggaaa
aagtttcgagggaaatatggtttaatcgagcattcggattcgtggtgcaagccttgccat
tcaaatggtgatgacatgtctcgggattttctgccaggatcatccaactacatatcctca
ctatctccatgcggcgacggcctcctcatgacaaatgccaacgattcagctgcctgctca
gctgccattgcagctgcatctatcatggacatgcaccttaactcggttccatgctcagcg
gcccaactcattcacaacaacaacgtggccagttcaagtgggtctaatattctaaccatg
gactcgatccttctaacctcaccggccggctcccacgggcctgccggcaatctttgcaat
ccctcacctcccatgctgtccttgggcccgcactctcatttgtctggacatcactcattg
ccaccctcctcccatggcgatggaggcggcaatttgaatttcccgcctttgaatcatcat
gaattgatgtccttagaacagcagaagatggtgctgtcgccagagggagctggcgcgaat
gaccaatcgcctaaatacatatccttgtaa
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