Tigriopus californicus (tidepool copepod): 131888998
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Entry
131888998 CDS
T09700
Name
(RefSeq) flap endonuclease GEN-like
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcf03400
]
131888998
DNA repair and recombination proteins [BR:
tcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
131888998
BRITE hierarchy
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
Motif
Other DBs
NCBI-GeneID:
131888998
NCBI-ProteinID:
XP_059093961
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All DBs
Position
10:complement(11002059..11004088)
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AA seq
609 aa
AA seq
DB search
MGIKTLWPIVECSGETVDLRQLSGQVLAVDLAGWVVQNNQCRAMSHGKVAKPHLRNVFFR
TATLLSLGIRPVFILDGHAPVLKRETMTQRKAAQMGMSTQEVEVKSLNRNRLKAVMNECK
FLLSALGVQCLAAQGEGEALCAQLNQVGLVDGVISDDSDAFCYGAKIVLRNFSISAKSFS
VERFTAKKLVNDLRLSRDRLLFMAILLGCDFCPAGVSGVGKESVLKMFRAWPVSMDAIRV
LQYWIGIEFQTWTTCSSPKYCQNGPEDLHCDACEKWQNSVSDEDCLCQRLKQDPSLVKVE
NGLKKKCLLLPMDWWRDEMPKVLAEFDVKETVPTDLSEFTTYSCPKIKQCLSIMCKKLLW
VEEYAMEKLIPLLTKWQIEHLSVGGRQEVIEPEVFVKKRIVSGVSCVVIRWRLINAQAED
MEGLPETFESCDAAELFSQVYPEFYLNYVQTTKPTKKTTVVRKPRALTVKKTNKENEPVT
CEEQAQKPITQFFSQQKPVHVVETRPIEALESHNETEVFDCSDLSFIIDDIINKGAMKRQ
VVETSPLKSNGLHSPLKTSTPTSHRPLKKELRLVQRATTNLRMRSIPHSPVVEDQDPFDI
EDSFDRMCK
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcaagaccttatggccgatcgtagagtgctctggcgagactgtggatctccgc
caattgtctggacaagtgttagccgtagatttagcgggctgggtggttcaaaacaaccaa
tgccgggccatgagtcacgggaaagtggcaaaacctcatctgcggaacgttttcttccgc
accgccaccctcctatcattgggtattcgacccgtatttatcttggatggacatgccccc
gtgctcaagcgggagaccatgacccaaaggaaagctgctcaaatggggatgagcactcaa
gaggtggaggtgaaatccttgaatcgtaatcgcctcaaggctgtgatgaacgaatgcaag
tttctcctgtcagccttaggggtccaatgtctcgcggctcaaggggagggggaggccctc
tgtgcccaactcaaccaggttggcctagtagatggtgtgatatccgatgattcggatgcc
ttctgttacggagccaaaatagtcctgcggaatttttcaatctcagctaagagtttctcc
gtagaacgattcacggccaaaaagctggtgaatgacttgagactctcgcgtgaccgtctc
ttgtttatggccatactcttagggtgcgacttttgtccggcaggtgtgtccggagttggt
aaagagagcgtgttgaaaatgtttagagcatggcccgtgtctatggacgctattcgtgtg
ctccagtattggattgggattgaatttcaaacttggaccacgtgttcgtcccccaagtat
tgtcagaatggtccggaggatcttcattgtgacgcatgtgagaagtggcaaaactcggtg
agtgacgaagattgtctttgtcagcgactcaagcaagatccgagtcttgtcaaagtagaa
aatggattgaagaagaaatgcttgcttttgcccatggattggtggcgcgatgaaatgcca
aaagttctggctgagtttgacgtcaaggagacggtacccacggatctaagtgagttcact
acttacagttgccccaagatcaaacagtgtctctccatcatgtgcaagaaactcttgtgg
gtcgaagaatacgccatggaaaaactcattccacttttgaccaaatggcagattgaacat
ttgagtgtgggtggtcggcaagaagtgatcgaacccgaagtcttcgtcaaaaagcgcatt
gtaagtggagtatcttgtgttgtgattcgatggcgattgattaatgctcaggccgaggac
atggaaggattgcccgaaacctttgagagttgtgatgcagcggaacttttcagccaggtg
tatcctgaattttatttgaactatgttcaaactacgaaaccaaccaaaaagaccacagtt
gtgcggaaacctcgagcacttacagtaaaaaagactaacaaagaaaatgaacccgtcact
tgcgaggaacaagcacagaagcctataactcagttcttttctcagcaaaaacctgtacat
gtggtcgaaacgagaccaattgaagcactggaatctcacaatgagacggaggtttttgat
tgttcggacttgtcctttattattgacgatatcattaacaagggtgcaatgaaacggcaa
gtggtcgagactagtcccttgaagtcaaatggccttcactcgccgttgaagacatccacc
ccgacctctcacaggcctttaaagaaagagttaaggttggtgcaacgtgcaacgaccaat
ctcagaatgcggtccattcctcattcccccgttgttgaagatcaagatccatttgatatt
gaagactcctttgatcgcatgtgcaaataa
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