Tigriopus californicus (tidepool copepod): 131889013
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Entry
131889013 CDS
T09700
Name
(RefSeq) PC4 and SFRS1-interacting protein-like
KO
K25057
PC4 and SFRS1-interacting protein
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
131889013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131889013
Spliceosome [BR:
tcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
131889013
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
MUM1-like_PWWP
HEPN_DZIP3
Skp1
DUF4941
Motif
Other DBs
NCBI-GeneID:
131889013
NCBI-ProteinID:
XP_059093982
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All DBs
Position
1:984425..987297
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AA seq
481 aa
AA seq
DB search
MVKKSFSVGAKVWAKVRGYPAWPARIEKDKGSGKYEVFFFGTYETAICKRDDIWDYNQET
KDKFAKQKNKKGFAEGLYEIENNPDIQTAEKLMAMEEEAGLEEAAGAPAAPEAPLKSSAV
SDPDTGASDGVGESELTIDEGKSAKRAPAKRGTKRRAEDSPTVVATPPPTKQSRAAAAAA
TPVTTQPDAAAAEKISRSGRVIKPKKFDDEIVPEKEGDTPNKLTTPTTNTAPASKKEPRK
MWVQVKATGDMIEINLDKDRPVTFESKEAEIQWEKVTAKNALKFKDKVESGQFIPDEIRK
KLEQKLNRTPEEEEILRKERELSNKKEKIKWLKIEQRLVDLDLAIKQSLHYLRPEMEACL
EALAELGTLSLTPLMLKKQPDIVTTIRKLRKYVGPQSESTPKDTNPSNDDWSSRAQEIRL
KANQVFMKLQSTFTTAEGANFWETFESQLVEFRSATQGMERKKLLSLVADPTQKATGKRA
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagaagagcttttccgtgggcgccaaggtgtgggccaaggtgcgcgggtatccg
gcctggccggcccgcattgagaaggacaaaggcagtggcaagtacgaggtcttcttcttc
ggcacctacgaaacggccatctgcaaacgggacgacatctgggactataaccaggagacc
aaggacaagttcgctaaacaaaagaacaagaaaggctttgccgagggtctctatgagatc
gaaaacaaccccgacattcagacggccgaaaaactcatggccatggaagaagaagccggg
ctggaggaggcggcgggagctcccgccgcgcccgaagcccctcttaaaagcagtgccgtc
tcagaccccgacaccggagcatcggatggggtgggcgagtcggaattgaccatcgacgag
gggaaatccgccaaacgagcgccggctaaacgcggtaccaaacgccgagccgaggattca
ccgaccgtggtggccacccctccccccaccaaacagtctcgagccgcggccgctgcggcc
acacccgtcaccactcagcctgatgcggcggcggccgaaaaaataagccgatccggacgc
gtcattaaacccaagaaattcgatgatgagatcgtgccagagaaggagggtgacacgccc
aataaattgaccacccctacgacgaataccgcaccagcttcgaaaaaagagcccaggaaa
atgtgggttcaggtgaaggccacgggtgacatgatcgagatcaatttggataaggaccga
ccggtgactttcgagtcgaaggaagccgagatccaatgggaaaaggtcaccgccaagaac
gccctcaagttcaaggacaaagtcgaaagcggtcagttcatcccggatgaaatccgaaag
aaacttgagcagaaactcaatcgaacccctgaggaggaagagatcctacgaaaagagcgg
gagctgagcaacaagaaggaaaagatcaaatggttgaaaatcgaacaacgattggtggat
ctggatctggccatcaagcaatcgctccattacctccgccccgagatggaggcgtgtctc
gaggccctggccgaattgggcacgctctctctgacgccgctcatgttgaagaaacagccc
gatatcgtgaccaccatccggaaactgcggaaatacgttggccctcagagcgaatccacg
ccgaaagacacgaatccctccaatgacgactggtcgagtcgagctcaggagatccgattg
aaggccaaccaagtgttcatgaagcttcaatccacattcaccactgccgagggggccaat
ttctgggagacctttgagagtcagctggtggaattccggagcgccacccagggcatggaa
cgcaagaagctactgtctctcgtggccgatcccactcaaaaggctacggggaaacgggcc
aattag
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