Tigriopus californicus (tidepool copepod): 131889014
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Entry
131889014 CDS
T09700
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131889014
04121 Ubiquitin system [BR:
tcf04121
]
131889014
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
131889014
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
131889014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
DUF3289
Ferritin
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
131889014
NCBI-ProteinID:
XP_059093979
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All DBs
Position
10:165770..167807
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AA seq
565 aa
AA seq
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MFEKRGKFNAKCLYCDKDYKTPNQATTTLWHHLRKKHMVELARIEGQFNVPKPTATIYAH
DSAKKMNLDQSLCLMVVKDLQPLSFVEDEGFKKFCHSLDPRYTLPSRRTLSEVHITNMFS
DVQEKLIIYLHRANWVSITTDMWSSVNCTGFLAITVHFFDEQTWSLQCFILDCLRVRGRH
TSEKIATEIRMVLERNKIMDKVIVGVNDNGANVVKAIRDIGITHVACYAHSLNLVANYAL
REVPSLCAIKDAASKIVEQTRKSTQVMELFERIQQDQGRTRPKKLIQNVPTRWNSTFEML
ERLLDLKGPVSTLLTEPGMREKVGIFDSNTWQGIFDAVRVLKPLFEATVELSSENRTTGS
KIVPITKMLITNYDIFVQNSVPGTVRHDLAKAIKQNLVRRFTSVEDNVKLSISTILDPRF
KTKCFRDETRGTFATDQIQAELLEVNRQEPVRPKRCSPPVHSSLWETFDSKVVEERPALL
DLQCYLNSPCQPRWTNPLDWWKQIGREKHPELFQIVKKYLSIPATSVPSERVFSSAGQIL
SKKRNRLGDENARKMICLHGNVDII
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaagcgtgggaagttcaatgctaaatgtttgtactgtgataaagattacaag
acaccaaaccaggcaaccactacactttggcatcacctccggaaaaaacacatggttgag
ctggcaaggattgaaggccaattcaacgtgcccaagcccactgcaacgatatatgctcac
gatagtgccaaaaagatgaacttagaccaatccctgtgtctcatggttgtcaaggactta
caaccgttatccttcgttgaagacgagggattcaagaaattttgtcattcgcttgaccct
cgctacactctaccttcaagacgaactctatcggaagtgcatattacaaatatgttttcc
gacgttcaagaaaaactgattatctaccttcatcgggccaattgggtatccattacaaca
gatatgtggtcttcggtaaattgcactggattccttgcaataacggtccacttctttgac
gaacagacttggtcactccaatgtttcatattggattgtctaagagttcgaggccgtcac
acctccgaaaaaattgccaccgaaattcgtatggtcttggagcggaacaaaataatggac
aaggttatcgtgggagttaacgacaatggagcaaatgtggtgaaggcgatacgagacatt
ggtattacccatgtggcatgttatgcccattctttgaacttggtggccaactatgcacta
agagaagtaccctctctttgcgctattaaagacgctgcctcaaaaatagtggagcaaacc
aggaagagcacccaagtaatggaattattcgagaggatacagcaagatcaaggccgaact
aggccgaagaaattgatccaaaacgtgccaacgagatggaattccaccttcgaaatgctc
gagcgacttctagacctgaagggtccagtctcaaccttgcttaccgagccagggatgcgg
gagaaggtgggaattttcgactctaatacgtggcaaggtattttcgacgcggtgcgagtt
ctcaaaccactttttgaagccacggtggagctatctagcgagaataggacaacggggtcc
aaaatagtgcccataacaaagatgctcattacaaactacgacatctttgttcaaaattca
gtccctggtactgtgaggcacgatctggccaaggccatcaaacaaaacttggttcgtcgt
ttcacatctgtcgaggataacgtcaagctttccatctcgacaatattagatccccgtttc
aaaaccaaatgcttcagagatgaaacgagaggcacgttcgccaccgatcaaattcaagcc
gaattgttggaggtcaatcgccaagagcccgttcgtccaaagagatgttcgccaccagtc
cactcatcactgtgggagacatttgattcaaaggttgttgaagaaaggccagcgcttttg
gacttgcaatgctacttgaattccccatgccaaccaaggtggaccaatccactagattgg
tggaaacaaatcgggcgcgaaaaacatccagagttgttccaaatagtcaagaaatatttg
tccattcccgccacatccgtgccgtcagagagggttttttcttcggctggacaaatcctc
tcaaagaagagaaaccgcttgggggatgaaaatgccagaaaaatgatatgcctccatggc
aatgtggatataatttga
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