Tigriopus californicus (tidepool copepod): 131889050
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Entry
131889050 CDS
T09700
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131889050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131889050
Spliceosome [BR:
tcf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
131889050
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
131889050
NCBI-ProteinID:
XP_059094022
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All DBs
Position
10:complement(8282939..8284730)
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AA seq
535 aa
AA seq
DB search
MAKTRGEAQESTGIDEQGSKMALKRRQDALDHDKYDEDDAMANVGSEAKRRELANASKSV
ECPYLDTIDRNVLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGQNTHAYTHSVSDGHRV
FLNLETKKFYCLPDNYEIIDPSLSDILYVLDPIFSPDMIRQIETTSKEVRALGGMRYLPG
VVGLNNIKANDYCNAVLQAMSHVGPIRKYFLDRNNYKDIKRPPGDLSAILVQRFGELIRK
LWNPRNFKAHVSPHEMLQAVVLCSKKKFQITAQGDAEQFLTWLLNALHMALGGTKKAQSS
IIYKAFRGEMRIHTKKILPTDVDESKREEMLTLDEFQWKTTESPFLHLTLELPPPPLFKD
EIQENIIPQVSLFNVLAKFNGMTEKEYNTYKDNFLKKFEIIKLPPFLILYFKRFTKNTFF
LEKNPTIVNFPIKSVEFGDLVAPEFKHLYPDNAAYDLVANIVHEGPPKGGIYKAHILHEG
SGKWFEMEDLHTGAALPEVLPLSEAYIQIYKRINEPLKDGKKSVQTKGKEGTMNK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaactcgaggagaagcccaagagtcgacgggaattgacgagcaggggtctaag
atggccttgaaacgtcgccaagatgctttagaccatgacaagtacgatgaagatgatgcc
atggccaacgtcgggtcggaagcgaagaggcgtgaacttgccaatgcatccaagtccgtg
gaatgcccgtacttggacacgatcgatcgaaacgtgctggactttgatttcgaaaagctg
tgctcggtgagcttgtcccgcatcaatgtgtatgcttgcctggtttgcggcaagtacttt
caaggccgaggacagaacactcacgcttacacgcattcagtcagtgacggtcatcgcgtg
tttctaaatctcgagaccaagaagttctattgtctcccggataactacgagattatcgat
ccttccctctcggatatcttgtatgttctcgatcccatttttagcccggacatgattcga
cagatcgagaccacgtccaaagaggtcagagccttaggtggcatgcgctatttaccagga
gtggtgggtctgaataacatcaaagccaatgattactgcaatgccgtgctccaggccatg
tctcatgtgggtcccatccgaaaatatttcctggatcgaaataattacaaggatatcaaa
aggcctccaggtgatttgagtgccattttagttcaacgctttggcgagctgatccggaag
ctttggaacccccgaaatttcaaggcccatgttagccctcatgaaatgcttcaggcggtc
gtgttgtgctccaagaagaagttccagatcacggcacagggggatgccgaacagttcctt
acatggcttctgaatgctcttcacatggccttagggggaacgaaaaaggcgcagtcaagt
attatctacaaggcttttcgcggggaaatgcggattcacaccaaaaaaattcttcccacc
gatgtggacgagtcgaagcgtgaggagatgctcactttggatgagttccaatggaaaacc
acagagagcccttttctgcatttgactttagaactgcctccaccccctttgttcaaagac
gagattcaggaaaatataattcctcaagtgagcttgttcaatgtgttggccaagttcaac
ggtatgactgaaaaggagtacaatacctacaaagacaatttcctcaagaaatttgaaatt
atcaagttaccgccgtttctaatcttatattttaaacgatttacgaagaacacgtttttc
ctggaaaagaatccgacaatcgtgaatttccccatcaagtcggttgagtttggagatctg
gttgcaccggagttcaagcatctataccccgacaacgccgcgtatgatctggtcgcaaat
atcgtacacgaaggaccacccaaagggggcatctacaaggcccacattcttcatgaaggt
tctggaaaatggtttgaaatggaagatcttcatacaggagcagctctacccgaagttctt
cctttgtcggaggcctatattcaaatttataagcgcataaatgagcccctaaaagatggg
aaaaagtccgtacaaacaaaaggaaaagaaggaactatgaataaataa
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