KEGG   Tigriopus californicus (tidepool copepod): 131889087
Entry
131889087         CDS       T09700                                 
Name
(RefSeq) F-box DNA helicase 1-like
  KO
K10300  F-box DNA helicase 1 [EC:5.6.2.4]
Organism
tcf  Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tcf04121]
    131889087
Enzymes [BR:tcf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     131889087
Ubiquitin system [BR:tcf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     131889087
SSDB
Motif
Pfam: UvrD-helicase UvrD_C_2 Viral_helicase1 UvrD_C AAA_19 F-box-like F-box AAA_22 AAA_30
Other DBs
NCBI-GeneID: 131889087
NCBI-ProteinID: XP_059094071
LinkDB
Position
10:7813074..7817218
AA seq 896 aa
MSSSPLMSLPVEIQCRILGQVPWVDLLSSVSLVCRSLRDLVAHPQFIPWKRRYHRYLRLP
AESEISLTDSAEFLASIQPYRCLQSGSFNQQELFSGGIEWLLQAITRDGRRKRIPLLIPT
DTQNPRLETARQVLTSTLPGCQAEPWSILTLALMLEMNVGHVLSWVRNLCGPNGLLDLPD
TLEWLYHVAWCLKLAERHDMLSYRPHYTVFHVIFCLENDLGPSNVLHGEKTLMDRLTVEQ
KRIVHYPINPASRGAIKVVAFAGTGKTSALQCLVRANPGFHFLCIVFNKVIQDQTNLVFP
HNAQAYTINSLSYRFLIEKGYSRTRLKPFSLTAYDVVMSGLVLSQGEGSGNVYTRSSQIL
CTLRNFACSVDEHIDISHVPCQWQPDLDSPPEALSLTWRERLLADSQNLWKRGITNQNHS
VNIEGSFQVKLFQLSKPNLKQLFRCDVILIDEGQDLNPAMLDITLGQDCTKFIVGDPNQQ
IYGFNGSVNGLALVESFCPLLKSFRLTQSFRFGPEIAYSASIALRRFRQDDTLTVFGRPD
IKDNFHGASMFTSARGQNKTVILCRTNISLIQALVKEVVLVPENIRPCISLAQGMASYLD
QLVDLAYLHDNQKDRLSSSCRHYFLSLGTFDAYVLRAKATLDKEADVKVQIVKKFSSNLP
YFVQVIKKCWRFRDFKDPAVELAFSTVHKFKGLEFPVVRLQDDFVQVDSNALSNCNSTSG
DEFNLLYVALTRAQREIVMNRSLLNLMVLSGENFSYFSPNFQVRTCVVCHEWIKPRQNVL
QVSRQIVALSSSLYIPGGPICGHCIETPFQPISHVDTLNRICALQPKPPLLDSLKLFLCP
LWSDTFHQKGAEAPHTDLKALIAQISSSYTFRPIPPTAQEPFGDDSDNEFWAGIQI
NT seq 2691 nt   +upstreamnt  +downstreamnt
atgtcctccagccccctgatgagcttgccggtcgagatccagtgccgaatactcggccaa
gtgccttgggtcgatctcttgagctcggtcagtttggtgtgtcggtcactccgggacttg
gtcgctcatccccaattcattccttggaagcgacggtatcatcgatatctccgtctgcct
gccgaatctgagatctcgctgaccgacagtgcagaatttctggcctccatccagccctac
cgatgtcttcaaagcgggtctttcaatcaacaggaattgttctcgggcggcattgaatgg
ttacttcaggccattacccgtgatgggcgtcggaaacgaattccattgctcatccctacc
gatactcaaaatccccggttggaaacagctcgtcaggttctgacctcgactctaccgggt
tgccaggcagagccttggtcgattctaactttggccttgatgctggaaatgaacgttggt
catgtgttatcttgggtccgaaatttatgcggtcccaatggtctcttggatctacccgat
accttggagtggttgtatcacgtggcctggtgtctcaaattggccgagagacatgatatg
ctctcttaccgtccacattacacagtctttcatgtcatcttttgccttgagaatgacttg
gggccctcgaacgtcctccatggggagaaaaccctcatggaccgcctaaccgttgagcaa
aagcgaattgttcactatccgattaaccctgcaagtcgtggagcaatcaaagtagtggct
tttgcgggcacgggaaagacctcagctctccaatgcttggttcgagccaatcctggattt
cacttcctatgtattgttttcaacaaggtaattcaagaccaaaccaatctggtgtttccc
cataacgcccaagcgtataccattaacagcttgagttatcgctttctgatcgaaaaaggt
tattcaagaacgaggttgaaacccttcagtctgacggcctacgacgtggtgatgagcggt
ttagtgcttagtcaaggtgaaggatcggggaatgtttatacccgctcctctcaaatactt
tgcacgttgaggaactttgcgtgttccgtggatgaacacatcgacatcagccatgttcca
tgtcaatggcaaccggatcttgattcgccgccggaagctctgtcgttaacgtggcgtgaa
cgtcttttagcagattcacaaaatttgtggaaacgcggcataacgaaccaaaaccattct
gtgaatatcgaaggctcgtttcaagtgaaactctttcaactctcgaaaccaaatctcaaa
cagcttttcagatgcgatgtgatactcatcgacgaaggacaagatttaaacccggccatg
ttagacattacactgggccaggattgtacaaagttcatcgtgggagatcccaaccaacag
atttatggatttaatggatccgtcaacggactggccctggttgaatcgttttgtccattg
ttgaaaagcttccgtctgacacagtcattcagatttgggcccgaaattgcctactcggct
tctattgcgctccgtagattccgtcaagacgacaccctcacggtgttcggtcgaccagat
atcaaagataatttccatggggcctccatgttcacgtccgcccggggacaaaacaaaact
gtgatactctgtcgaaccaatatcagcctgattcaggctctcgtgaaggaggttgttctt
gttccagaaaacatcagaccttgcattagcctggcccaaggcatggcatcctacttggat
caattggtggacctagcctatttgcacgacaaccaaaaagaccgattgtcgagctcgtgt
cgacattatttcttgtctttgggaacctttgacgcctatgtattaagagcgaaagccacc
ttggacaaagaggccgatgtcaaggttcagatcgttaagaaattctcatccaatttacca
tattttgttcaagtcattaaaaagtgctggcgattccgcgatttcaaagatcccgcggta
gaattggcgttttcaacggttcacaaattcaaaggtctcgaatttccggtggtgagactt
caagatgactttgttcaggttgattcaaacgcattgtctaattgtaattccacgtcaggc
gatgagttcaaccttctctacgtagccttgacccgagctcaacgcgaaattgtgatgaac
agaagcctcttgaacttaatggtcctctcgggcgagaacttttcgtatttcagcccaaat
ttccaagttcgtacttgtgttgtgtgtcacgaatggattaaaccacgtcaaaatgtcttg
caagtcagtcgacaaattgtggcactgtcaagtagtctctacatacctggcggacccata
tgtgggcattgcattgagactccatttcaacctatctcgcatgtcgatactttaaacaga
atatgcgcactgcaacctaaaccacctctgttggattccctgaaacttttcctctgtcct
ctctggagcgacacttttcatcaaaaaggggccgaagcaccgcacacagacttgaaggcc
cttatcgcgcaaatcagttcatcttacacatttcgtccgattcctccgacagctcaagaa
ccttttggcgacgattcggataacgagttttgggccggaatccaaatatag

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