Tigriopus californicus (tidepool copepod): 131889113
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Entry
131889113 CDS
T09700
Name
(RefSeq) probable small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131889113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131889113
03032 DNA replication proteins [BR:
tcf03032
]
131889113
Spliceosome [BR:
tcf03041
]
Complex A
U1 snRNP components
Sm proteins
131889113
U2 snRNP components
131889113
Complex B
U1 snRNP components
131889113
U4/U6.U5 tri-snRNP components
131889113
Complex C
U2 snRNP components
131889113
DNA replication proteins [BR:
tcf03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
131889113
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
131889113
NCBI-ProteinID:
XP_059094103
LinkDB
All DBs
Position
10:complement(7756374..7757970)
Genome browser
AA seq
121 aa
AA seq
DB search
MAGTLTKSKSEMTPEELERKEEEEFNTGPLSVLTQSVRNNTQVLINCRNNKKLLGRVKAF
DRHCNMVLENVKEMWTELPKTGKGKKKAKPVNRDRFIPKMFLRGDSVILVLRNPLSQSQD
P
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atggccggcactctgaccaaatccaagtctgaaatgacgccggaggagctggagcggaag
gaggaggaggagttcaatacgggcccgttgtcggtgttgacgcaatccgtgcggaacaac
acgcaagtgctgatcaattgccggaataacaagaagctattgggccgggtcaaggccttc
gatcgacattgcaacatggttctcgagaacgtcaaggaaatgtggacggaactgcccaaa
acgggcaaaggcaagaaaaaagccaagcccgtgaaccgagatcgcttcattcccaagatg
ttcctccgcggtgactctgtcatacttgtactaaggaatcctctctcacaatcccaggat
ccataa
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