Tigriopus californicus (tidepool copepod): 131889147
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Entry
131889147 CDS
T09700
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcf03021
]
131889147
Transcription machinery [BR:
tcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
131889147
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
EFTUD2
Motif
Other DBs
NCBI-GeneID:
131889147
NCBI-ProteinID:
XP_059094149
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All DBs
Position
10:7112956..7115085
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AA seq
546 aa
AA seq
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MAPPTIGGPPVGAAAPPTRVAAHGGAGAPPSSRPSSERSSRSARHVDERKSELVCRVKYS
NTLPDIPFDPKFIAYPFETNRFIHYVPTSLERNYKYELLTEPDLGVTVDLIRPETYAKPE
QEFDEYGNKVDPPLDAKDERLLEEDMSDKTDAKRSQRHAQILSWMRRPDYISTEQTRYQP
TTIEKIESKVGFAVRKKMGNDQPIFMDREAQVTAIEKTFEDAKIPIEKHYSKAGVYPVDV
VPILPDDKMWKYPCAQVIFDSDPAPQVEGVGNPVQQNEMMSQAMIRGVMDESGEQFVAYF
LPTLENMEKRAEDMVDGREYDEEGSYEYKMFREYNWNVKSKATKGYEENFFFIVREDGVF
YNELETRVRLSKRRLKAGQQPSNSKLVVKHRPLGKQEHKMQRYREKYLEPPNEEDEEMSE
DDEEEEAEGMIKDTENDEVQSRSRSSSPARSRSRSKSGSAASSRSRSVSRSRSRSRSVSR
SRSRSRSKSGSVKSRAGSRSVSKSPSRSRSVSRSVSRSRSGSPASRSRSSSASRSAASAK
SGSESD
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctccgcccaccatcggtggaccgcccgtcggggccgcggcaccccccacacgcgtg
gcggcccacggcggcgccggtgctcccccatcctctcgaccctcttcagaacgctcctca
cgatccgcccgacacgttgatgaacgcaaatccgagttggtttgccgggtgaaatactct
aatactctacccgacattccttttgacccgaaatttatcgcctatccgttcgagacgaat
cgcttcattcactacgtgcccacgtctttggagcgaaactacaagtacgagcttctaacg
gagccggatttgggcgtcaccgtcgacctcatccgccccgagacgtatgccaagcctgag
caggaatttgacgaatatggcaataaagtggaccccccgttggatgccaaggacgagcgg
cttttggaagaagacatgtcggacaagacggatgctaagcgctcgcaacgtcacgcccaa
atcttgtcttggatgcgaaggccggactatatttcgacggagcagacccgatatcagccc
actacaattgagaagatcgagtccaaagtgggctttgccgtccggaagaagatgggtaac
gaccaacctattttcatggatcgcgaagctcaagtgacggccattgagaagaccttcgag
gatgctaagattcctatcgagaaacactattccaaggccggtgtgtatccggttgatgtg
gtgcccatcctacccgatgacaagatgtggaagtatccttgcgctcaggtcatctttgac
tcggatccagccccgcaagtggaaggcgtgggtaatcctgttcaacagaacgagatgatg
tctcaggccatgattcggggtgtgatggacgaatcgggcgagcagtttgtggcttatttc
ctccccaccctcgagaacatggagaaacgggccgaagacatggttgatggtcgagaatac
gacgaggaaggttcatatgaatacaagatgttccgtgagtacaactggaacgtcaagagt
aaggccaccaaaggctacgaggagaatttctttttcatcgtacgcgaggatggcgtgttc
tacaacgaactggagacaagggtgagactgagcaaaaggcgcctaaaagccggccaacag
ccatccaattccaaattggtggtcaagcaccgccccttgggcaaacaggagcataagatg
caacgataccgagagaaatacttggagcctcccaatgaagaggatgaggagatgagcgaa
gatgatgaggaagaagaagccgagggcatgatcaaagacaccgaaaatgacgaagtgcaa
tcccgctcgcgatcctcttcccctgcccggtcaagaagccgctccaaatcgggctcagct
gcctcatcgcggtcccgttctgtctctcgctctcgatcccgctccagatctgtatcccgg
tcgagatcgagatcccgttccaaatccgggtccgtcaaaagtagagcgggaagccgatcc
gtgtccaagtcgccttcccgttctcgatcagtttctcgctcagtgtccagatctcgctcc
ggtagtccggcttcccggtctcgatccagttcggcgagtcgttcggcggcgagtgccaaa
tccggatccgaatctgattga
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