Tigriopus californicus (tidepool copepod): 131889148
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Entry
131889148 CDS
T09700
Name
(RefSeq) syntaxin-3-like
KO
K04560
syntaxin 1A
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
131889148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131889148
Membrane trafficking [BR:
tcf04131
]
SNARE
Syntaxin (Qa)
Stx-PM
131889148
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin
New_glue
Pab87_oct
Motif
Other DBs
NCBI-GeneID:
131889148
NCBI-ProteinID:
XP_059094151
LinkDB
All DBs
Position
10:7108839..7110760
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AA seq
377 aa
AA seq
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MVRNRLDELHSQSKHAPVTEEEEMAPLYKEEKKRAKEKGGAGNGSGGLGDAFESFAQFLA
RFEDVVKKIDTIQAHADEIRIIQKSLLMATHKDETKEARMNDLIHENKMLAQAVRNTIKK
DQDILENKSPKKMTQPQQQEYRIKKTQVNTQSKRFYDIWTAYNNQQVEFRDKSKQLLVKR
CKITNKNLTEDQIETMLDEGNTAVFAKSILDQENLARQQLSDLHDRHDELIKLERSIKEV
HDMFLEIAHLVAEQGEMIDSIERNIMDAGMSAEAGRGHLQKAENYQISARKKKVCLFSVL
SVLLLIVFIVILIEFGAFSGGSDSETVRTIIEERVVYVTASTTTSTSTTTLTSSSTTDST
ASTTNTPQSTPSTTAVP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtaatcgtctcgacgagctccactcgcaatccaagcatgcgccggtcacggaa
gaggaggaaatggctcccctctacaaggaggagaagaagcgggccaaagagaagggcgga
gcgggaaacggcagcggtggtttgggggatgcgttcgagagctttgctcaatttctggcg
cgattcgaggacgtggtcaagaagatcgacaccatccaggcccatgctgacgagatccgc
atcatacagaagagcttgctcatggccacccataaagatgagacaaaggaagcccgcatg
aatgatctcatccatgagaacaagatgttggcccaagcggtacggaacaccatcaaaaag
gaccaggacatcctggagaacaagtcgcccaagaaaatgactcaacctcaacagcaggag
tatcgcatcaagaagacccaggttaatacgcaatccaaacgcttttacgatatctggacg
gcgtataataatcagcaggtcgagtttcgtgacaaatccaagcaacttctggtcaagcga
tgcaagattaccaacaagaatctcacggaggatcaaatcgagaccatgctggatgagggc
aacacggccgtattcgccaaaagtatcctagaccaggagaatttggctcgacagcaactc
tcagatttgcacgatcgccatgatgagctcatcaaattggagcgctccatcaaagaggtg
cacgacatgtttctcgagatcgcacatctagtggccgagcaaggtgaaatgatcgacagc
atcgagcggaatatcatggacgcgggtatgagtgccgaggctggacgagggcacctgcaa
aaagccgaaaactaccaaatctcggcgcgcaagaagaaagtctgtctattcagtgtactg
agcgtgctcttgctcattgtcttcatcgtgatcttgatagaatttggtgctttcagcgga
ggcagtgattccgaaactgtccggacaataattgaagagagagtggtttacgtgacggca
agtacgaccacctccacgagtaccaccacgctaacatcatcatccaccaccgacagtact
gcttctaccaccaacactcctcagtctactccatctaccacggccgtcccttag
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