Tigriopus californicus (tidepool copepod): 131889264
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Entry
131889264 CDS
T09700
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131889264
Membrane trafficking [BR:
tcf04131
]
Protein recycling
Others
Retriever complex
131889264
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Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
131889264
NCBI-ProteinID:
XP_059094320
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All DBs
Position
10:complement(5171685..5176901)
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AA seq
969 aa
AA seq
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MTTVSPYPWRAQGPSLGNHRLSHPPGTWQLAWVHPLQVQEAKNQGSSLPKEFKPTQTIIK
KPVQAEKPPRAAFIDPLTAMMASPEDEDALGCVSIPADDEMDGVKSAESRDADWSKSELE
ALWTQLGQSAMTYHDSTRLLIPETLHYILDKLNFDDESTSRNARLDMLEGRQTRRSNPEK
NGLTPKQFGDFLDLVTHQLSNYWTEDKRVQVLRLVIQIAKILGDMDKSGLSGYPAFFFQI
TEVLVFFGRLVYDRIASKCPGLRMNFTSHDATPQAQEMCKNWLLKIMSIRELVPRLYLEI
AFMRCFRFIDDPEYFYKTVLDRLTKSIRGLSDPIAACYLRAFLVRSAFQVLQSSNLSLAQ
KISQSNYSEFVLTYVTFGVDKASSLGLSTSSYLRLYSPPFQWLLQAQLFGQNAWDKDQIM
KKSLNAVDTDKCPAFVYEHIFAVLSPSLIEGQVSHVSHVVANCAQDPSYSVENLICVFGK
VLTNCYSLTRTEKLNVLNTIWHCVMDIHDLHAYLKCALVWTEFAVKQLQPKEINTLLGNI
VSQTNSTLSRDGTKSSSDQLPKIVQSLLSSQDSLERTLTLSNFLPLFNTMSKGSQIEMAK
ILVERAIKDVQEISDPVLSNVLIHLCDILGDSINALSIQDETRQISAFICHVIRKVKFED
DFEQQLKFLTDCRGKYSHLTAVQLQLIHSVHLLAIHTLERANGKISTRIKGFLQACCAFV
FITIPSIDPRLTQVQLCIEAAEVCLMCRCFGQAESSLKVLFKTLGELGQAHEANRDLRER
KELECTLLGLCSQLFSLLLVVPDNVEHGILYMIRGALNAINRFPWSLHSAHRAELNIRAL
QLLSVVTWDDYPYHIEGLDSNDVLYGSNPKFVDEVNQISGTVLGQVLDQIQDLTSNGFKK
ESGRLSWQLLQTCYGFVDLESSEKLVKLAQKLWSLSKKQNELQPQTDRLLQEVKLRKDER
ATMWKRVLL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgtcagtccatatccctggcgagctcaaggcccgtctttagggaaccaccga
ctgtcccatccccccggaacatggcaactagcctgggttcatcccctccaagtccaagag
gcgaaaaaccagggctcatctctgcccaaagaattcaaaccaacccagaccattatcaag
aagccagtccaggcggaaaagccgccaagagcggcctttatcgatcctttgacggccatg
atggccagtccagaggatgaagatgccttgggatgcgtgtccatcccagctgacgatgag
atggatggtgtcaagtccgcggagagtcgcgacgcagattggtcaaaatctgaattagaa
gcattgtggacgcaactcgggcaatctgccatgacctatcacgattccactcgactgctc
atcccggagacgttgcattacatattagataaactgaatttcgatgatgagagcacatcg
cgaaacgctcgattggacatgctagaagggcgtcaaacccggcggtccaacccagagaag
aatggtttgacgcccaagcaatttggcgatttcctcgacctcgtcactcaccaattgtcc
aattattggacggaagacaaacgtgttcaagtgttacgtttggtgattcaaatcgccaaa
attctcggggacatggataaaagtggcctgtctggctatccggccttcttttttcaaatc
acagaagtcttggtcttctttggccgtctcgtatatgacaggatcgcctcgaaatgtcct
ggtcttcggatgaacttcacctcccatgatgccacgcctcaagcccaagagatgtgcaag
aattggttgcttaagatcatgtccattcgagagttggtccctcgattgtatttggagatt
gcatttatgcgttgctttcgcttcatcgatgatcccgaatacttttacaagactgttctg
gatcgactcaccaaatcgattcgaggcctcagtgacccgatagcagcttgctatttgagg
gcgttcttggtccgctccgccttccaagttttgcaatcctcgaacttgagtttggcccag
aaaatatctcaatccaactacagcgagttcgtcctcacatacgtcacatttggtgtcgat
aaagcgtcaagcctgggattgtctacctcgtcgtatttgcgattgtattcgccgcctttt
caatggcttctccaagcccaactttttgggcaaaatgcttgggacaaagatcaaatcatg
aagaaatcactcaacgcagtggataccgataaatgtccggcttttgtctacgagcacatt
ttcgccgttctcagcccgtctttgatcgaaggccaagtcagccacgtgagtcatgttgtc
gccaattgtgcccaggatccaagttattccgtggaaaatttgatttgcgtttttggaaaa
gttttaacaaattgttactccctcacccggacggaaaaactgaacgttttgaacacaatc
tggcattgcgtaatggacattcatgacttgcatgcgtatctcaaatgtgctctagtgtgg
accgagtttgcggtgaagcaacttcagcccaaagaaatcaacaccctactagggaatata
gtttcccagaccaattccaccttgtcgagggatggcacgaagtcgtcttctgaccagtta
cccaagatcgttcaatctcttttgtcgagtcaggattccctggaacgaaccctgaccttg
agcaatttcctgcccttgttcaataccatgagtaaagggtctcagatagaaatggccaag
attctcgtcgagagagcaatcaaagatgttcaagagatctcggatccggttctctccaac
gtactcattcatctctgtgacattcttggcgattccatcaatgccctttccattcaagat
gaaacaagacagatatccgctttcatttgtcatgtgattcgaaaagtgaagtttgaggac
gatttcgagcaacaactcaagtttctaacggattgccgaggcaaatactcgcatttgaca
gcggttcagctccaattgatccactccgttcatttattggccattcatactctagagcga
gccaacgggaagatatcaacccgaatcaaagggttcctgcaggcttgttgtgcgtttgtg
ttcataaccattccatcgattgatcctcgcctgacacaagtccagttatgcatcgaggcc
gcagaagtgtgtttgatgtgccgatgttttgggcaagctgaaagcagccttaaggttctc
ttcaagacccttggagaactcggccaagctcatgaagcgaatagggatttacgggagaga
aaggagttggagtgtaccttgctggggttatgttcccagttgttctcgttgttattggtg
gtgccggataacgtcgagcatggaatattatacatgattcgtggagctctcaacgccatc
aatcgtttcccttggtctcttcactctgcccatcgagccgagctcaacattcgggctctt
caattgctgtccgtggtcacttgggatgattatccatatcacattgaagggttggattcg
aatgatgttttgtatggttcgaatcccaagttcgtggacgaggtgaaccaaattagtggt
acggttctagggcaagttttggatcagattcaagatctgacgagcaatgggttcaaaaag
gagagtggccggctgtcttggcagctcctccagacctgctatggttttgtggatctagaa
tcgagcgaaaagctcgtaaaattagctcaaaagctttggtccttgtcgaagaagcagaat
gagcttcaaccccaaaccgacaggttactccaagaagtcaaacttcgaaaagatgagagg
gcaacaatgtggaagagagtcctcctctaa
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