KEGG   Tigriopus californicus (tidepool copepod): 131889352
Entry
131889352         CDS       T09700                                 
Name
(RefSeq) target of rapamycin complex subunit lst8-like
  KO
K08266  target of rapamycin complex subunit LST8
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf04136  Autophagy - other
tcf04140  Autophagy - animal
tcf04142  Lysosome biogenesis
tcf04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    131889352
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    131889352
   04140 Autophagy - animal
    131889352
   04136 Autophagy - other
    131889352
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tcf04131]
    131889352
Membrane trafficking [BR:tcf04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    131889352
   mTORC2 complex
    131889352
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_TEP1_C Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_WDR41 CFAP251_N Beta-prop_WDR75_1st Beta-prop_NOL10_N WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_HPS5 ASA1 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_VPS8 MIOS_WD40 Hira Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_WDR35_2nd Tricorn_2nd Beta-prop_NUP159_NUP214 Beta-prop_ACSF4 Beta-prop_IFT122_2nd Beta-prop_SCAP
Other DBs
NCBI-GeneID: 131889352
NCBI-ProteinID: XP_059094424
LinkDB
Position
10:11060609..11062015
AA seq 345 aa
MSAPVPGGRRGSANPAAKALGNQPAPGQDLNGGMSPSGQVILATAGYDHTIKFWEVGTGQ
CLKTLQHADSQVNALEISPDGQLLAACGYQHIRMFDVLGTNPNPVVNYEGVSKNVMDVGF
QEECKWMYTAGEDGTVKIWDLGMRNLSCQRIYDAHAPVNSAVLHPNQQDLILGDQNGVVH
VWNLRSDQSEQYIPQAGCSVQSVAVDSQGLHMACVTNQGTLHVWDLPSGEKNPALAEQRQ
KITAHKRYGLKCKFSPDSSALATSSADQSTKLWRPKDLTHITDLHKSGQRWVWDMAFSND
SQYLFTASSDCIARLWSLAKNEVKCEYVGHSKALTCLAFRDRLVT
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgagtgcgcccgtgcctggcggccgacggggcagtgccaatccggcggccaaggccctg
ggcaaccagccggctcccggccaagatttgaacggcggaatgagtcccagcggtcaagtg
attctagccacggctggatatgaccacactattaaattttgggaagtgggcacggggcag
tgtctgaagacgctgcagcacgccgactcgcaagtcaatgccttagaaatcagtccggat
gggcagctcttggccgcatgtggctatcagcacatccgcatgtttgacgtattgggcacc
aatcccaatccggtcgtcaactacgagggcgtgagtaagaatgtcatggatgtgggcttt
caggaagaatgcaagtggatgtacaccgccggcgaggacggcacggtcaagatttgggac
ttgggcatgcgaaacttaagttgtcagcgcatctacgatgctcatgctccggtcaactcg
gccgtgttgcatcctaatcaacaagacctcatcttaggcgatcaaaatggcgtggttcac
gtgtggaatctccgttccgaccagagtgagcagtacatcccgcaagccggatgcagcgtc
caatccgtggccgtcgatagtcagggattgcacatggcttgcgtcaccaatcaaggcacg
cttcacgtgtgggacttgcctagtggggagaaaaatccggccttggctgaacagcgccag
aagatcacggcccacaagcgctacgggctcaaatgtaaattcagtccggattcgtcggct
ctggccacgtcttcggccgatcagagcaccaagctctggcggcccaaggatctgacacac
attacggacctccataagagtggccagcgttgggtttgggatatggccttttcgaatgac
tcccagtatctttttactgccagttctgactgcatcgctcgactgtggtccttggccaag
aacgaggtcaagtgcgaatatgtgggccattccaaagctctcacgtgcttggccttccga
gatcgacttgtgacataa

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