Tigriopus californicus (tidepool copepod): 131889421
Help
Entry
131889421 CDS
T09700
Name
(RefSeq) macrophage mannose receptor 1-like
Organism
tcf
Tigriopus californicus (tidepool copepod)
Motif
Pfam:
Lectin_C
Chordopox_A33R
UL45
Xlink
Podoplanin
DUF4690
SKICH
Motif
Other DBs
NCBI-GeneID:
131889421
NCBI-ProteinID:
XP_059094501
LinkDB
All DBs
Position
10:7217028..7226427
Genome browser
AA seq
2313 aa
AA seq
DB search
MKRHRVALAFRAAFLTSLLAGCASISIKCDPGWYGLPESQSCFRFMRHSENNYDNSRTIC
QNLGGELAIIDTPDRRNYVASVIGQIHESTSKWWVGIHFNEDGAKWVWGDGSALNENITP
WDDNDENLEGKCGGITHNGKLSKTDCSTAWDYVCQKKIGSKFDCPLNWDPFGDSCYKTYM
EEEPKGFEEAQAHCQSEDESSLVIIETEHENAFLADISTAFKKTFWIGASDNATGKFYWL
DGTELGQEPHDFQNWGDEQPVSTNTSAVYLDPNNEGKWITMAKSERQAFICERAKGAFCQ
MGLQPGPSDKCYDFNLNLQKTFAWDLSQVTCEKYGMNLVSVSSSEESEWVNKALYDSYLF
SDGNQVADGTWIGYKEKSDKPEDDGKFSNIDGTIDLDNEGVFDGRQDDLVYQKTIQECLY
MKVCLENETDETCDFLSTKDKRWFNSPCDMTGIDQPSHTYACESLQGKDLDLSNAIQVNQ
SCPEDWRGPFVGFCYNPLPVEVTWGEGVNMCKDLNAQANLASILSPLEDQYVRSLILTLK
HDAWIGLNDRLTANSWQWSDESPFNYAGWAEGQPNDYEEESCVEINPSRVGWNDDKCSNK
QSIVCKVAATTQQGDEPVVPQTTTAIPTENCGYGWFDFPVLNNGKCYTIVEELMSWNSAQ
TECEIRAGYQRSGNLVSVNSNEENIALATYLSSTGQNGAHWIGLNDYNAEGGFEWRDGSP
VTFVSWADGEPNAMVSFEDCVEMAVDDSQVKWNDHHCNKTIPAICQRHSRHYEPPTKPPP
TKPQCPDGWLPTMDKCYWFSAPKDVSASNWTHAKDLCKSQDPLASLTTTINQEEREFVAA
HIYGKSFIGATDVNNEGEWVWDQTGDIVQVNFWAEGEPNGQDKENCMAIDHEGNWADVPC
TVADNKQMDFVCSVPNDMCPEDWIYFDGHCWIFHDDIKDFDSAEQSCGELNHRAHLASVL
NREDNWFVRHFISEDQPAGNWLGLKLDGEDWTWTDKSPLGYTDWDADANEPDQPEEQKCG
WVDPASRMWRSGQCNNDKNFMCKFEPTHVRGCDPGWELWEESCYLAETIATDWTSAQRDC
VVKGGDLVSVESNEENDFINTLIHTHSYCKSGWIPDLDLKRCFKIISTDMVWEDAAKECD
LMGGTLISIKSEEKNTKMLDLVKNANVYKMWLGATDKLEEGKFMWLDETPIDDGYMNWME
GQPSNDDPGEQCLSMLVQEDYFQEPGKWNDDKCDSTEKFICETNFQDEEAPVEKMWIGLS
DLESLMTFKWSDHHPVQFTRWGSKEPDKHAGDGKDCTYFDRKDQTWNLRSCSDPFQSICK
KPSKIVPTENPPYGCNVGEIAFEGSCYEFHGDALSYFEAKAKCQDTNGDLVSLNTWEEID
KITSVVAEHPHHYWIGLISHDGAEFIWQDGSAVYETNWGPEEPNNERGQCVHVMDRVAIG
KWEVQDCSNQHSYICEKPRAGYTVPPPPPTSTYVPINCPDTYSWVSYEGHCYKIIEDSAG
FEAGRDACRALGADAVSFTSEEEDTSVVSKLLVTSWSTSFFIGLRLSENPEEGFYWVDGS
PVNYVNWISDPTSDKCAIATTDGTSSLGWQSMNCEESYPIVCEISQDQIPTTPPRPTSEP
DIPCEGSEGWWQRESNDEFCYKFDATGNSWFDAEKACSSEKGHLVSIHDMAENDYIFAKM
HQVYADTLWIGTTRRFSENWMWKDQSPSDFFNWAPDEPNNDMGMESCGRMYIAQQFGQWN
DDHCGERASFACKKYRDPDAITNPPITATPPGHCPPDQAEYEGQCFKLIDSGLEGEHSLP
YQEAELECRKLGSTYHLASIHNLGAMSFLSTLMVHPDVVGTSFWIGLNKGIDHMNFIWTD
ESNNNYFNWEANQPSYDAYVDCVKIMGSGSINKIGQWSVAECYENLPYICRGRPSLDNSD
PPPTEKCALEGFDHFDSFYGNCYLYVKEEKSWNDAEQYCQEQNAHLASVENLAENSYLVN
FMAAQHTWIGLSNVGHHEEMAWSDGWPTKYDNWGNDLNIGEDMDLCGQYNNTDGKWFATA
CDEKLSFACKYSEKVPPTLGPFGECPENWEDLPGPFCYNFLQDSELGVPFSEALFQCQKQ
GGDLLSIGDAEENERIQKFVQDLKRDIWIGLVDVGDGDWKWSDNSAFVYTNWAPDEPNDV
SEECAMMFHDNGQWNDFNCNTYELGYVCKRDKIQGPTTPKPDEISTKPSETTTTTKKSST
STTHAPTTSKEDSDPDPSEKGLGGGAIAGIVIGCLIAVGGAIAGLMIVKQHNIMPLRQFS
KGNQKKTRTTESYDSPVYMNFQDEDPEEIQTHA
NT seq
6942 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgacatcgagtggctttggccttccgtgcagcctttttgacttcattgctggca
ggttgtgctagcatctcaatcaaatgcgatccaggctggtacggtttgccagaatctcaa
tcctgtttccgattcatgcgacactctgagaacaactatgacaattctcgaaccatttgc
caaaatttaggcggagaattagccattattgatactcccgatcgaaggaattatgtggcc
tcagtcattggtcaaattcacgagtcaacctccaagtggtgggtaggaattcatttcaac
gaagacggtgcgaagtgggtgtggggtgatggatccgctttgaatgagaacattacacca
tgggacgataatgacgagaacttggaaggcaaatgtggtggcatcactcataatggcaag
ttgtccaaaactgattgctccactgcttgggattatgtgtgccaaaagaagattggatca
aaattcgattgccccttgaattgggatccttttggtgattcgtgctataagacttacatg
gaggaagaacccaaaggttttgaagaggcacaagctcattgtcaatcagaggatgagtca
tctctcgtgatcattgagaccgagcacgaaaacgctttcctggccgacatctcaaccgct
ttcaagaaaacattttggattggagcttcggataacgccaccggaaaattctattggctc
gatggaactgaacttggacaggagcctcatgattttcaaaattggggcgacgaacaaccg
gtgagtacaaacacaagtgcagtctacttggatccgaataatgaaggcaaatggatcacc
atggcaaaaagcgagcgccaagcattcatatgcgaacgcgccaaaggagccttttgtcaa
atgggattgcaacccggaccctctgataaatgctacgacttcaatctcaatctacaaaag
acatttgcatgggatctaagtcaagttacttgcgagaaatacggaatgaacttagtcagt
gtgtcaagcagtgaagagagcgaatgggtcaataaagctctctacgattcatatttgttc
tcggatgggaatcaagtagcagatggaacatggattggctataaagaaaaatcggacaaa
ccagaagacgacggaaagttctcgaacatcgatggcacgattgaccttgataatgaagga
gtatttgatggtcgtcaagatgacttggtttaccagaaaaccatacaagagtgtctttac
atgaaagtatgcctcgagaacgaaactgacgagacctgtgactttctttccacgaaggac
aagcgatggttcaactcaccctgtgacatgactgggatcgaccagccatctcacacctat
gcttgcgaatccctccaagggaaagatttagatctgtccaatgccattcaagttaatcaa
tcgtgtccggaggattggaggggtccattcgtcggattttgctataatcctcttccggtg
gaagtgacttggggtgagggggtgaacatgtgcaaggacctgaatgctcaagcgaatttg
gccagtattctgtctccattggaggatcagtatgtgagaagcctcattttaaccctgaag
catgatgcgtggattggtctgaatgatcgattgacggcgaactcttggcaatggtccgat
gaatcgcctttcaactatgcagggtgggccgaaggtcaaccgaatgattatgaagaggag
agctgtgtggaaatcaatccgtccagggttgggtggaacgatgacaagtgctcgaataag
caatctattgtgtgcaaagtggctgcaaccacgcaacaaggagacgaacccgtggtccca
caaaccacgaccgctattccaacggaaaattgcggttatggttggttcgattttcccgtc
ttgaacaacggcaaatgttacactatagtcgaagagctcatgtcatggaattcagcccaa
actgagtgcgaaatcagagccggctatcagagaagtggaaatctggtttccgtgaattca
aacgaggaaaacattgccctggctacctatttgagttccacgggacaaaatggagctcat
tggatcggattaaacgactataatgcggagggtgggtttgaatggcgcgatggctcccct
gttactttcgtgtcttgggcggatggcgaacccaacgccatggtgagctttgaggattgt
gtggagatggcggtggatgactcgcaagtgaaatggaatgatcatcactgtaacaaaacc
attccggccatttgtcaaagacatagtcgacactatgagcctccaactaagccgcctcca
acaaaaccacaatgtcctgatggttggttgcctaccatggataaatgctactggttttcc
gccccaaaagatgtgagtgcctcaaattggacacatgccaaggatctgtgtaaaagtcaa
gatccactagcctccttgaccacaaccatcaatcaagaggaaagagagttcgtagcagcc
catatctacggcaaaagttttattggagccactgacgtgaataacgagggggaatgggtt
tgggatcagactggggacattgtgcaagtcaatttctgggctgaaggagagcccaacggc
caggacaaggagaactgtatggccatcgatcatgaagggaattgggcagatgtaccatgt
accgtggccgataacaagcaaatggattttgtctgcagtgttccaaacgacatgtgtccc
gaggactggatctatttcgacgggcattgctggattttccacgacgacatcaaagatttt
gattcagccgagcaatcgtgcggagagctgaaccatcgggctcacttggccagtgttttg
aatcgagaggacaattggtttgttcgtcatttcataagtgaagatcaacccgcaggaaat
tggttaggactcaagttggacggtgaagattggacttggacggacaaaagccccttgggg
tacaccgactgggatgctgacgccaacgagccagaccagccggaagagcagaagtgtggt
tgggtggacccagcatcccgaatgtggcgatcaggccaatgcaacaatgacaagaacttt
atgtgcaagttcgaaccaactcatgtgcgcggttgtgatcctggttgggagctttgggag
gaaagctgttacttggctgaaacaatagccaccgattggacatcagctcaaagggattgc
gttgttaaaggaggagatctcgtgtcagtggaaagcaatgaagaaaacgacttcatcaac
acgctgatccacactcattcatattgcaagagtggctggatcccggatctagatctgaaa
cggtgctttaaaatcatctcgactgatatggtttgggaggatgcagcgaaagaatgtgac
ctcatgggaggaacgttgatttccatcaagtccgaggagaagaacacaaaaatgctagat
ttagtcaagaatgctaacgtttataagatgtggcttggagccactgacaaattagaggag
ggtaaattcatgtggttggacgaaacacctatcgacgatggatatatgaactggatggaa
ggtcaacctagtaacgacgatcccggagagcaatgcttgagtatgcttgtgcaagaagat
tattttcaagagccaggaaagtggaacgatgataagtgtgattcaaccgaaaaatttatc
tgcgaaacaaactttcaggatgaagaagcgcctgtcgaaaagatgtggataggcttgtca
gacttggaatctttaatgacattcaaatggtcggaccaccatccagttcaattcacccga
tggggtagcaaagaaccagataaacatgctggcgatggaaaagattgcacttattttgac
agaaaggatcagacttggaatttaaggtcttgctcagatcccttccaatcaatttgtaaa
aagccatccaaaatcgtacccaccgaaaaccctccgtatggatgtaatgtgggtgagatt
gctttcgaggggtcttgttacgaatttcatggagatgctttgtcttatttcgaggccaaa
gctaaatgccaagatacaaatggcgatttggtttctctgaatacatgggaagaaatcgat
aagatcacgtcggtggttgctgagcatccacatcattactggatcggtttgatatcccat
gatggagcggagtttatttggcaagatggatcggcggtctatgaaaccaattggggccca
gaagagccaaacaatgagagaggacagtgcgtccacgtcatggacagagtggccatcggg
aaatgggaggttcaagactgttccaaccaacactcttacatatgtgagaaacccagggcg
ggttatacggttcctccccctcctccaacctcaacttacgtccccatcaattgcccagac
acgtattcttgggtttcgtatgaaggtcattgctacaaaataatcgaggactcggctggc
tttgaagcgggcagagacgcttgtcgagcacttggagctgatgcggtttcatttacttcc
gaggaagaagatacatctgttgtgagtaagctgttagtgacaagctggtcaaccagtttc
ttcatcggtctgagattgagcgaaaatccagaagagggcttctattgggtggacggatcg
cccgtcaattacgtcaactggatctctgaccccacatctgacaaatgcgccattgcaaca
actgatggcacttcctcgctagggtggcagtcaatgaattgtgaggagtcatatccaatc
gtttgcgaaatatctcaagatcaaatacctaccacgccccctcgacccaccagtgagccc
gatatcccctgcgaggggagtgaaggctggtggcaacgtgagagcaatgacgagttttgt
tacaagtttgatgctacaggcaactcgtggtttgatgccgagaaggcttgctcaagtgag
aaaggccatcttgtgtcgattcatgatatggccgagaatgactacatttttgccaaaatg
catcaagtgtatgccgatacactatggattggaaccactcgacgcttctcagaaaactgg
atgtggaaagatcaatcccctagcgatttcttcaactgggcccccgatgagcccaataat
gacatgggcatggaaagttgcgggagaatgtacatcgcacaacagttcggccaatggaac
gacgatcattgcggagaaagggcctcatttgcgtgcaagaaatatcgagaccctgatgcc
atcactaacccacctattacggccacgccacctggacattgtccgccagaccaagcagag
tacgagggacaatgcttcaaattgatcgattctggtttagagggagaacacagtttgcct
tatcaggaagccgaacttgaatgtcgaaaattgggttccacgtaccatttggctagtatt
cacaacttgggagcaatgtcatttttgtccacactgatggtccatcctgatgtggttggg
acctcattttggatcggcttgaacaaaggaatagatcatatgaatttcatttggacggac
gaatcgaataacaactacttcaattgggaggctaaccagccatcatatgacgcctacgtg
gattgcgtaaaaattatggggtcaggttcaattaacaagattggtcaatggagcgtggcc
gagtgttatgaaaatttgccatatatttgtcgaggacgaccttctttggacaactctgac
cctccacctaccgagaaatgtgctctagaaggcttcgatcattttgacagcttttacgga
aattgttatttgtacgtgaaggaagagaagagttggaatgatgcggagcaatactgccaa
gaacaaaatgcccatttggcttcagtcgagaacttggccgagaactcttacctcgtgaat
tttatggcagcccaacacacctggataggattgagcaatgttgggcatcatgaagaaatg
gcgtggtcagacgggtggccaactaaatatgacaattggggcaatgatctcaacatcgga
gaggacatggacctttgcggccagtacaataacaccgacggcaaatggtttgctactgcc
tgtgatgaaaagctaagctttgcttgcaaatattccgagaaggttccaccaacccttggt
ccttttggcgagtgccccgaaaattgggaggatttgcctggaccattctgttataatttt
ctccaagactcagagttgggagttcctttctccgaagctttatttcaatgccaaaagcaa
ggcggcgaccttttaagcatcggagatgccgaagagaatgagaggattcaaaaattcgtt
caggatctcaaacgtgacatttggatcggcttggttgacgtaggagacggagattggaag
tggtccgacaattccgccttcgtttacaccaattgggctccggatgaacccaatgacgtc
agtgaggaatgtgcaatgatgttccacgacaacggccaatggaatgacttcaattgcaac
acctacgagctcggatatgtttgcaaaagagacaagattcaaggcccgacaactccaaaa
ccagacgaaatctcaaccaaaccttcagaaacgacaaccacaactaaaaaatcgtcaact
agtaccacccatgcaccaaccacatcaaaagaagatagtgatccggatccttcagagaaa
ggcctcgggggtggagctatcgctggtatcgtaatcggctgtttgattgcagtgggcgga
gcaatagccggactgatgattgtcaagcaacataatatcatgcctttgagacaattttca
aaagggaaccaaaaaaagacacggacgacagaaagctatgacagccctgtgtatatgaat
ttccaagacgaggatccagaagagatccaaacgcatgcatga
DBGET
integrated database retrieval system
