Tigriopus californicus (tidepool copepod): 131889431
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Entry
131889431 CDS
T09700
Name
(RefSeq) E3 ubiquitin-protein ligase RMND5A-like
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131889431
Enzymes [BR:
tcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131889431
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
131889431
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_2
Rtf2
DUF5371
Motif
Other DBs
NCBI-GeneID:
131889431
NCBI-ProteinID:
XP_059094512
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Position
10:complement(12922169..12923605)
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AA seq
407 aa
AA seq
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MDSILSVERELYALSEKFNRFDSTNGQQLVHTLETLRSTQRELDQVRKSGAALTPAQTFS
LMKTVQGLSEVVSTFGTVHRDLHSSVSKVGKAIDRNFVTDYDSTSREDIFKAADQQKRLN
EVILQHFYRHGQLEISDTLAQEAKLEDAHVIKDRFQELNAVVEALAEKRLGPALEWASKN
SSDMHRAPEASSRAVTRLQSSSLEMKLHKLRFIDLLVEGKCLEAVGYARHYFPQFVKSHE
KEVQALMGALMFASSGKTLEDSPYAHLLDTMLWQDIVEHFVKDACALMGLSIESPLSVVI
NAGCIALPALLNIKQVMQQRQVAGVWNPNAKDELPIEIDLGPECRFHSIFACPILRQQTT
EQNPPLKLTCGHCISKDALTKLTSGHKLKCPYCPVEQNPQDARQITF
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggattccattttgagcgtggaacgtgaactgtacgccctgagcgagaaatttaaccga
tttgactctacgaatggccagcaattggtccacactttggagactttacgtagtactcaa
agagaactggatcaagttcgtaaaagcggagcagcattgactccggctcaaaccttcagt
ttaatgaagaccgttcaggggttgtcagaagtggtgtccacatttggaaccgtccataga
gatcttcattcgtcggtgtccaaagttgggaaggctattgatcgtaattttgtaactgat
tatgactccacttcgagggaggatatcttcaaagctgcggatcaacagaaacgactcaat
gaagtcatcttacagcacttttatcgacacggccagttagaaataagcgacactctggct
caagaggctaagcttgaggatgctcatgtcatcaaggaccgattccaggagctcaatgcc
gtggttgaggccctggcagaaaagaggcttggtcccgccctcgagtgggcgtcgaaaaac
agctccgacatgcaccgggctccagaggcttcaagccgtgcagtgacccgactccaatcc
tcgtcattggagatgaagctccacaaactccggttcattgaccttctcgtagagggcaaa
tgtctggaagcggtgggatacgcccgccattatttcccccagttcgttaagtcgcatgaa
aaagaggtccaagcgcttatgggcgccctgatgttcgcatcgtcgggcaagaccctggag
gactctccttatgcccacctattggacaccatgttatggcaagacatagtcgagcacttt
gtgaaggacgcttgtgccctgatggggctctcgattgagtcaccattatccgtggtaatt
aatgccggatgtatcgctctaccagctctattgaatatcaaacaggtcatgcaacagcgc
caagtggcaggtgtttggaatcccaatgccaaagacgagttgcccattgagattgacctc
ggaccagaatgccgctttcactccatctttgcctgtcccatcttgagacaacaaacaacc
gagcagaacccgcctttgaaactcacatgtggccattgcatctccaaagatgccttgacc
aagctaacatccggacataaactgaagtgtccctattgccctgtggagcaaaatcctcaa
gacgcgaggcaaatcacgttttga
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