Tigriopus californicus (tidepool copepod): 131889468
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Entry
131889468 CDS
T09700
Name
(RefSeq) TBC1 domain family member 9-like
KO
K19951
TBC1 domain family member 8/9
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131889468
Membrane trafficking [BR:
tcf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
131889468
Endosome - Golgi transport
Rab GTPases and associated proteins
131889468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_7
EF-hand_1
EF-hand_6
Serglycin
Sod_Fe_C
DUF1015
Motif
Other DBs
NCBI-GeneID:
131889468
NCBI-ProteinID:
XP_059094557
LinkDB
All DBs
Position
10:complement(6607947..6613254)
Genome browser
AA seq
1137 aa
AA seq
DB search
MWVKPSEVLVSGPLWTIERANPHFLLQRRKGRGTKGLSSLLVGTWDTVLNTKPPTYRILH
QSEDSEVYLLVSEAMESREALKDWQWLEKELLPTLTDISTEEASDFVRAKIESLLAIDKA
EHAYTSVEDAESIPYREASEKFRRLFNVSEDDKLVSYYSASYWKGKFPRQGWAYLTVNNL
AFYSYILGQEIKLLLRWTDVTQINKSHTILAPESVEITTRDQVYYFSFFLSSVEAFALIQ
QLANLGMRKLINDDTYQHDLELLLKRSKNVPKKASFLKRDLDARKMSEKFRMLFQVPNTE
KLDGQVECYIWTPFNQKYRFGRLYISQNFICFQSHVANLASLIIPLRDVTCVEKTDSQPN
GNTVDEAISIAMKTTKKPFIFAQIPDRNFVVEKLSDLLSKLEDPSENVLTKSGSGSGSGV
GSDYVTNVSLPTTCSSSGSFENMEPCEPLMNIFKEDHHLDQSLEATKEILWEKHFSEFGR
GVSMFRTVECTNLILKGIPDRFRCELWMNSSGAVHEKLSHPGYYNLMVEQSQGLKTVAND
EIERDLHRSLPEHPAFQGDIGINALRRILSAYAHRNPQIGYCQAMNIVASVLLIYCSEED
AFWLLVAICERFLPDYYNTKVVGALIDQGVLDELLKDEIPDLSSRLEELGMIKSISLSWF
LTIFLSVMPYQTAVHVMDAFFYDGARVLFTMALIILARNESFLLKCLDDGEAMTKLTEFF
KSILRDDPDYHQSPSKVDRQPTISLLLNESYHTFEHITRESIEKLRLQHRLRVVQNLEDT
QMKHVLRSVDQSQTKITDDEIQALFVMVKNGQLERTSAMFVDPQEKADPNRHYYELYKID
LDTFKNVFQYVSPWGEGPEMGQVLAERLFRLMDTNDDNLLNFKEFVYILDMVCKGDHIKK
LKLLFCLHLPGVVLPGELESPDSVDGAEMACDASDFFIGKDDPSREKKVSAASLDHDDLD
FADIPADEPETRAKESDLKELNKILFGSESKTDLKKFPPLPQKNFIHLWKTLHDMFLQPS
SNPAMVDFDIENLYHSVSIVGTLLLQIGEVGQKVQSSSKAQEEFGSSLPKLPNLPPEPIE
NWSISFEQFLACVLNEAVLVEYFDRKIPIQMGLAKMNSTRLMRQDSISLTNRSVFYV
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcaagccgagcgaggtgttggtgagcgggccgttatggaccatcgaacgggcg
aatccgcatttcctgctccaacgacgcaaagggcgcggcaccaagggcctctcgtcgctt
ttggtgggcacttgggacacggtgctcaacaccaaaccacccacttatcgaatcttgcac
cagagtgaagattccgaggtgtatctactcgtatccgaggccatggaatcccgcgaggct
cttaaagattggcaatggttggagaaggagctgctgccgaccttgacagatatcagtacc
gaggaggcttcggattttgtccgtgccaaaatcgaaagcctcttggccattgacaaggcc
gaacatgcatatacctctgtcgaagacgccgagtcgattccttatcgggaggccagtgag
aaattccgcaggcttttcaatgtgagcgaggatgataaattggtgagctactattcagcc
tcttattggaagggcaagtttccccgacagggttgggcctatcttacggtcaacaatttg
gcgttctactcgtacatcctgggtcaagagatcaaattgttactccgatggaccgatgtg
acccagatcaacaaaagtcacaccattttggcgcccgagtcggtggaaatcaccacccgg
gatcaggtgtattacttttcgttcttcttgtcaagcgtagaagcgttcgctctaatacaa
caattggctaatctcgggatgcggaaacttatcaacgatgacacctatcagcacgatcta
gagctcctattgaagcgcagtaaaaatgtgcccaagaaggcctcatttctcaagcgagat
ttggacgcccgaaaaatgtccgagaagtttcgtatgttgttccaagtgccaaacacggag
aaactggacgggcaggtcgagtgctacatttggacccccttcaaccagaagtatcgcttt
gggcggttgtacatcagtcagaatttcatttgctttcaatcccatgtggccaatctagca
agtctaatcatccccctgagggacgtgacgtgcgtggagaaaactgattcccaacctaat
ggaaatacagtggacgaggccatctccatcgccatgaaaactacgaaaaagccttttatt
ttcgctcagatccctgatcgtaatttcgtggttgaaaagctatcggatctcctctccaaa
cttgaggatcccagcgaaaatgttctgaccaaaagcggatctggaagtgggagtggagtc
ggcagtgattatgtgaccaatgtttcactccctacaacttgctcgtcttcgggcagtttc
gaaaacatggaaccttgcgaaccgctaatgaacattttcaaggaggatcatcatctggac
caatcattggaggccaccaaggaaatattgtgggagaagcatttcagcgaatttggacga
ggagtgtccatgtttagaactgtggaatgtacaaatctgatacttaaaggcattcctgat
cgattccgctgtgagttgtggatgaactcatctggtgccgtccatgaaaagttgtcccat
ccaggttattacaatctaatggtcgaacaatcccaggggttaaaaacggtggccaatgac
gagatcgaacgagatcttcaccgttccctccccgagcatcccgctttccagggggacatt
gggatcaacgccctccgaagaatcttgagtgcttatgctcatcgtaatcctcaaattggt
tactgtcaagccatgaatatcgtggcctccgtgctgttgatttattgctcggaggaggat
gcattttggctcctggtggccatttgtgagcgtttcctacccgattactacaacacaaaa
gtggttggagccttgattgatcaaggggtactcgatgagcttctcaaggacgagatccct
gatctgagctcccggcttgaagagctgggcatgatcaagtccatttccctctcgtggttc
ctgacaatctttctgagtgtgatgccatatcaaaccgccgttcacgttatggatgcattt
ttctacgatggagccagagttctttttacaatggccttgatcatcttggcgaggaacgag
agcttcctattgaagtgcttggatgacggcgaggccatgaccaagctaaccgagttcttc
aagtcgattctccgtgatgatcctgattatcaccaatcgccgtcaaaagtcgatcgtcag
ccaacgatttccttgcttttaaatgaatcataccacacatttgagcacatcactcgggaa
tctattgaaaaactccgactccagcatcggttgagagtggttcaaaacttggaagacacg
caaatgaaacatgttcttcgaagtgttgatcaatcccaaaccaaaatcacggacgatgag
atccaggcactcttcgtcatggttaaaaacggacaattggaaagaaccagcgctatgttc
gttgacccacaggaaaaagccgatcccaaccgacattactacgagttgtacaaaattgat
ttggatactttcaaaaatgtatttcaatatgttagtccttggggagaggggcctgaaatg
ggtcaagttctggccgaaagactcttccgactcatggatacgaatgacgacaacttgttg
aacttcaaggagtttgtctacatcttggacatggtttgcaaaggagatcacatcaaaaag
ctgaaactcctcttttgtcttcatttgcctggagtggttcttccgggtgagctagagagc
ccggattctgtagatggagcagaaatggcgtgtgatgccagtgatttctttatcgggaaa
gatgatccttcgagggaaaagaaagtgtcagccgcgtctcttgatcatgatgatttggac
tttgcggatattcctgccgatgaacccgagacgagggcaaaagagagtgacttgaaagag
ctgaacaagatccttttcggctcggagtctaaaaccgacttgaagaagtttccgcctttg
ccgcaaaagaattttattcatttatggaagaccctccacgatatgttcttgcaacccagt
tcgaatccggccatggtggactttgacattgagaatctgtatcattccgtgtccatagta
ggaactttgttgctccaaattggcgaggtgggacaaaaagttcaaagctcttccaaggcc
caagaggaatttgggagctcccttcccaaattgcccaatctgccccctgagcctatcgag
aactggtccatcagttttgaacaatttctggcctgcgtgctaaatgaagccgtccttgtg
gaatatttcgatcggaagattcccatccaaatgggtttggccaagatgaactccacccga
ttgatgagacaagacagtatttccctcactaatcgatctgttttctatgtgtga
DBGET
integrated database retrieval system
