KEGG   Tigriopus californicus (tidepool copepod): 131889518
Entry
131889518         CDS       T09700                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein XRCC1-like
  KO
K10803  DNA-repair protein XRCC1
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    131889518
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tcf03400]
    131889518
DNA repair and recombination proteins [BR:tcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     131889518
SSDB
Motif
Pfam: XRCC1_N BRCT PTCB-BRCT BRCT_2 DUF4211
Other DBs
NCBI-GeneID: 131889518
NCBI-ProteinID: XP_059094626
LinkDB
Position
10:complement(13153446..13155550)
AA seq 661 aa
MSLQITSNSSSQVSPEIDSVFSLIEEPPNCALECPVMPDVKISHVVSFSSEDPVYKADNL
LLNDGKKKWRSKAQGEKQVSAILQLEKATTIDHIDLGNNGSAFIEVQVARSQDCPDEKGY
KTLLVASSFMSPLESRNEQNQNRVRMFGKETLNQELIKEKWDRVKIVCSQPFNKHVKYGV
SFVTLKTIAKPTNGSEMPXTGIKLGAFVLKDEPSEDVSLSVGNWFNQKKDETRRTSMAEE
MKSEKTLASLALASSKAEKDGIKGAAIRPGFYQLKDQPKALTKTPTPDRGSVPKNLPRRD
TLPGESPTRPASKEQKKRKNAEGRTPGASGRDTKKAKIEHTPPASTRTKVFSKLFEGVIF
TISGYQNPLRGELRQKALDMGAKYRPDWSRDCSHLICAFANTPKFNQVKGKRGKIVKKDW
LEQSHRDRKRYPWRRFCLDPKDKGSESEAEIWDEDLLPTSSKALVENSDPDTDEEVERIR
SRRRSKTPILKSPGTDEEIESIKKEQVPDKTPNSSLVLTDPYDQDTDEEMPQNGHGSHPD
DSDEAYNAETDVDEEREEPDSNETYPTLPDFWAGQGFFFYGPFAPEEKRLLNRKIVAAGG
TTHPYMGPRVNFVVTKSKWSPDFSDALRDHPGLKFVRADFVHECWAAKSLINHDEFVVQR
R
NT seq 1986 nt   +upstreamnt  +downstreamnt
atgagcctacaaatcacttcaaattcatccagccaagtaagtccagaaatcgatagcgtc
tttagcttgatcgaggaacctcccaattgtgccttggagtgccccgtcatgccggacgtc
aagatatcccacgtggtgtccttttcatccgaagatcccgtgtacaaagccgacaacttg
ctcttgaacgatggcaagaagaaatggcgcagcaaagcccaaggtgagaagcaagtgtcc
gccattcttcaattggaaaaggccaccaccatcgaccacattgacctgggcaacaatggc
tcggccttcatcgaggtccaagtggctcgatctcaagattgtcccgacgagaaaggctac
aagaccttgctcgtggcctcatccttcatgtcgcccttggagagccggaacgagcagaat
cagaatcgggttcggatgtttggtaaagagaccctcaatcaggagttgatcaaggagaaa
tgggaccgggtcaagatcgtctgctcccaacctttcaacaagcacgtcaagtatggagtt
tccttcgttacgttgaaaacaattgccaagccaactaacgggtccgaaatgccctaaacg
ggcatcaaactgggagcctttgtcttgaaagacgaacctagtgaggatgtgagtctatcg
gtgggcaactggttcaatcagaagaaggatgagacccgacggacctcgatggctgaggag
atgaagtcggagaaaacgttagcttctctggccttggctagttccaaagcggagaaggac
ggcataaaaggggctgccatcagacctggtttctatcaactcaaagaccagcccaaagct
cttacaaagacgcccacccctgaccgagggtcagttcccaagaacttgccgaggcgagat
acccttccgggtgagagtcccacgcggccggcgagtaaagagcaaaagaagcgaaagaac
gctgaaggccgtactcctggagcctcggggagggacactaaaaaggccaagatagagcac
accccaccggcatccactcgaacgaaagtgttcagcaaactatttgagggcgtgattttc
acgatatcaggctatcagaacccattacgaggtgaactacgacaaaaagccctggatatg
ggggccaagtaccgacctgattggtctcgggattgttcccaccttatttgcgcctttgca
aacacgccaaagttcaatcaagtcaagggaaaacgcgggaagatcgtcaagaaggattgg
cttgaacaaagtcaccgagacaggaaacgttacccttggcgaagattttgcttggacccc
aaagacaaagggagtgagagtgaggccgagatttgggatgaagacttgctccccacgagc
tccaaggctctggtcgaaaactccgatccggacacagatgaggaggttgagcgcattaga
agtcgaagaagaagtaagacacccattctcaagtccccaggcaccgatgaagagattgaa
agtattaagaaagaacaagttcctgataagacgccaaattcgagcctcgtgttgactgat
ccctatgatcaagacacggatgaagagatgccacaaaatggacatgggtctcatcctgat
gattctgatgaagcctataatgccgagactgacgtcgacgaagaaagagaagaacctgat
tccaatgaaacctatccaacactgccagatttttgggcagggcaaggtttctttttctac
ggcccttttgccccggaggaaaagcgattgttgaaccgcaaaattgtggccgcaggaggt
acgactcatccttacatgggtcctcgggtgaattttgtcgtcaccaaatccaaatggagc
ccagatttcagtgacgccttgagagatcatccgggtctcaaattcgtcagagcagatttt
gtccatgaatgttgggcagccaagtcattgatcaaccatgatgaatttgttgttcaaagg
cgatga

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