Tigriopus californicus (tidepool copepod): 131889543
Help
Entry
131889543 CDS
T09700
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03015
mRNA surveillance pathway
tcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131889543
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
131889543
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tcf01009
]
131889543
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131889543
03036 Chromosome and associated proteins [BR:
tcf03036
]
131889543
Protein phosphatases and associated proteins [BR:
tcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
131889543
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
131889543
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
131889543
BRITE hierarchy
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
PDS5
Adaptin_N
Cnd1
Htt_N-HEAT_1
SCD
M11L
CLASP_N
Ant-IIb_sub-bd
Motif
Other DBs
NCBI-GeneID:
131889543
NCBI-ProteinID:
XP_059094653
LinkDB
All DBs
Position
10:12542742..12547203
Genome browser
AA seq
595 aa
AA seq
DB search
MSGGGVSDGNAAGSDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELI
PFLTDTIYDEDEVLLALAEQLGTFTPLVGGTEHVHCLLPPLESLATVEETIVRDKAVESL
RIIAEEHSSADLEAHFVPLVKRLATGDWFTSRTSGCGLFAVAYARVSSNVKADLRSLFRN
LCQDDTPMVRRAASGKLGEFAKVVEVEFLKSDLIPMFINLAMDEQDSVRLLVVESCVSIS
SLLQAEDVEQLVMPTLRNCAEDKSWRVRYTVAEKFTALQKAVGPEITKTDLVQAFQSLLK
DCEAEVRAAAAHKVRDFCQALDPSVQESVIMNNVLPCVKELVVDANQHVKSALASVIMGL
SPILGKNNTIEHLLPLFLNQLKDECPEVRLNIISNLDCVNEVIGIQQLSQSLLPAIVELA
EDSKWRVRLAIIEYMPLLAGQLGVEFFDEKLNALCMTWLIDHVFAIREAATNNLKKLVEQ
FGTDWAQQTIIPKVVAMARDQNYLHRMTCLFCINVLAEACGADVIERQMLPTVLNMAQDS
VANVRFNVAKTLSVVAPKLNASCFSSQIKPALNKLTEDTDFDVRYYASEASMVCA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtggaggcgtgtccgacggcaatgcggccgggtcggacgactcgctctatccg
attgccgtgctcattgatgagttgcggaacgaggatgtccagttgcgtttgaattcgatc
aaaaaattgagcaccatcgctttggcgttaggcgtggaacgtacgcgttccgagttgatt
ccgttcttgacggacacgatctacgacgaggatgaggtgcttttggccttggccgagcag
ttgggcacgtttacgcccttggtgggtgggacggagcacgtccattgtctgcttccgccc
ctcgagtctttggcaacagtcgaggagaccattgtgcgcgataaggccgtggaaagtctg
cgcatcattgctgaagaacactcgtccgcggacctcgaggcccactttgtgcccttggtc
aaacgcctagccacgggagattggttcacgtcgcgcacatcaggctgcggtctctttgcc
gtggcttatgcccgcgtctcttccaacgtgaaggctgatttgcgaagcctgtttaggaat
ttatgccaggatgacacgcccatggtgcgacgagccgcctcgggcaagctgggagaattt
gccaaggtggtagaggtcgagttcttgaagtccgatctaattcccatgttcatcaacctg
gccatggacgagcaggactccgttcgacttttggtagtggaatcgtgcgtgtccatctcg
tcgctgctccaagctgaggatgtggaacagctggtgatgcccaccttgcgcaattgcgcc
gaggacaagtcgtggcgagtgcgatacacagtggcagagaaattcacggcccttcaaaaa
gccgtggggccggagattaccaagaccgacttggtccaggctttccagagcctattgaag
gactgtgaggccgaggtgcgagcggctgccgcccataaggtcagagatttctgccaggcc
ttggacccgagtgttcaggagtctgtgattatgaacaatgtcttaccttgcgtcaaggag
ttggtagtggacgccaaccagcacgtcaaatccgccctagcctctgtcatcatggggcta
tcacccattctgggcaagaacaacaccatcgaacatcttttgcccctgttcctgaaccag
ctgaaggatgagtgtcccgaggtccggttgaatatcatttccaatctggattgtgtgaac
gaagtgattggtattcaacagctctcacagtcgttgttgccagccatcgtggagttggca
gaagactcgaaatggcgggtccgcttggccatcatcgagtacatgccccttttggccgga
caactgggcgtggagttcttcgacgagaaactcaatgccctctgcatgacttggctcatt
gatcacgtgtttgccatccgcgaagccgccaccaacaacttgaagaagttggtggagcaa
tttggaaccgactgggcccaacagaccatcattcccaaggttgtggccatggctagagac
cagaactacttgcatcgcatgacttgtctcttctgtatcaatgtattggccgaggcttgt
ggcgcagacgtgatcgaaaggcaaatgcttcccaccgttctcaacatggcccaagacagc
gtggccaacgtgcggttcaacgtggccaagaccctgagtgtggtggcccccaaactgaac
gcctcctgcttctcgtcgcagatcaagcccgctttgaacaaactaacggaggatacggac
tttgatgtgcgatattatgcttcggaagcatccatggtgtgtgcttag
DBGET
integrated database retrieval system
