Tigriopus californicus (tidepool copepod): 131889580
Help
Entry
131889580 CDS
T09700
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131889580
03009 Ribosome biogenesis [BR:
tcf03009
]
131889580
Enzymes [BR:
tcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131889580
Spliceosome [BR:
tcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
131889580
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
Pre-60S particles
Helicases
131889580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
WaaY
AAA_22
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
131889580
NCBI-ProteinID:
XP_059094699
LinkDB
All DBs
Position
10:complement(8609358..8611848)
Genome browser
AA seq
719 aa
AA seq
DB search
MIAMDLVKTLEETDTVDYLSSENSADEDEAVPQKVNRIEPLKGQSAPGRQDFEGDFDFVD
NQADYMKDTWSEVASYLKKKSRTTLNAKIAQVRQRMQTSTDDPHSEDVIVLSDDELVVDD
LNMKKGDARRKARKRVKAQTRAEPPPGLDQEEQAGSEEEEDQVDDDDDQRQVFDDQVCLT
NDEDMSAASFHTMNLSRPLLKATEALHFIHPTPIQKATIPLALAGRDICGCAATGTGKTA
AYMLPILERLLYRPKENCVTRVLILVPTRELGVQVFQVSKQLAEFTTISFGLSVGGLDLK
MQESSLRKSPDVVVATPGRLIDHLQNTPSFTLDSIEVLILDEADRMLDECFLEQMKEIVK
SCCPTRQTLLFSATMTDQVKDLAAVSLKKPVKVFVDSNREVTWNLRQEFVRLRQNKCHLR
EAVLASLVCRTFRDHTMVFVRTKRECHRLHILLGLLGLRVAQLHGNMSQANRLYALKQFK
EEEVDILLTTDVAARGLDITGVKTVINYELPNTVEQYIHRVGRTARAGRIGRSISLADEE
HRKMVKEIIRSARDPVKNRVIPVTIVDKYMNKIKGMAEQVKTVMEEEQAEREIASLENKA
NRMENELKTGPEPERTFKVGKAGHALPMLKKKRKKGPTFETEEDKKLFQESQYLTRESKR
SRKMKKIRTVHDAEPNEGGDDKRKKGKNIFDVSRKNVKRMRHEGSKAKREQRSQKRQRK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccatggatctggtcaagacgctggaagagacggataccgtggactatttgtcc
tccgagaattcggccgacgaggacgaggccgtgccacaaaaggtgaatcgcatcgagccc
ctcaagggtcagtcggctcccggtcgtcaagacttcgagggggacttcgactttgtggac
aatcaagccgattacatgaaggatacgtggtcagaagtggccagttatcttaaaaagaag
tcccgcaccacgttaaacgccaaaatcgcccaagtccgccaacgaatgcagacctccact
gatgacccgcactctgaggacgtgattgtgctttcagacgacgagttggtggtcgacgat
ctcaatatgaagaagggtgatgcacgccgaaaggcacgcaagcgagtcaaagcccagacg
cgcgcggaaccgcccccggggttggatcaggaagagcaggcagggtcggaagaagaggag
gatcaagtggatgacgatgacgatcaacggcaggtctttgacgatcaagtgtgcctgacc
aacgacgaggacatgagtgcggcctcatttcacaccatgaatctgtcgcgaccgttactc
aaagccaccgaagctctgcacttcattcaccccacacccatccaaaaggccaccattccc
ctggctttggcagggcgcgacatttgtgggtgcgcggccaccggtacgggtaaaacggcg
gcttatatgctgcccattttggagcgattattgtaccgcccgaaggaaaactgcgtgacc
cgcgtgctcatcctggtgcctacgcgcgaattgggagtgcaagtgtttcaagtgtccaag
caactggctgaattcaccaccatcagcttcggcctctctgtaggcgggttggatttgaaa
atgcaagaatcgtccctgcgtaaaagtccggacgttgtggtggctaccccgggtcgactg
atcgatcatcttcagaacacgccctctttcaccttggacagcattgaggtgcttatcttg
gacgaggcggatcgcatgctggacgagtgcttcctcgagcagatgaaggagatcgtgaag
tcgtgctgtcccacgcgacagacgctcttgttctcagccaccatgacggatcaggtcaaa
gatctggccgccgtctcgctcaagaagcccgtcaaagtgtttgtcgattcgaaccgtgag
gtcacgtggaatcttcgacaagaattcgttcggctgcgacaaaacaagtgccacctccgt
gaagccgtcttggcctcgttggtctgtcggaccttccgagatcacaccatggtctttgtc
cggaccaagcgagaatgccatcggctgcacattctcttgggattattgggattgcgagtg
gctcaactccacggcaacatgtctcaagccaaccgattgtatgccttgaagcaattcaaa
gaggaggaggtggatattctccttactacggacgtggccgctcgcggtttggatattacg
ggagtgaagaccgtcattaactacgagttacccaacaccgtggaacaatatatccatcga
gtgggccgaacggcgcgggcgggtcgtattggtcggtccatatctttggctgacgaagag
caccgtaaaatggtcaaggagatcattcgaagtgcgagggatccggtgaagaaccgcgtc
ataccggtcactattgtggataagtacatgaacaagatcaagggcatggccgagcaggtc
aagaccgtcatggaagaagagcaagccgagcgtgagattgccagcctggaaaacaaagcc
aatcgcatggaaaatgaactcaagacagggccggagccggaacgcactttcaaagtgggc
aaagccggtcacgccctacctatgttgaagaaaaaacgcaagaaggggcccactttcgaa
acggaggaggacaagaagctcttccaagagagccaatatcttacgcgggaatccaaacgg
agtcgcaaaatgaagaagatcaggaccgttcacgatgccgagcccaatgaaggcggtgat
gacaagcgcaaaaagggaaagaatattttcgacgtaagccgtaaaaatgtcaagcgcatg
cggcacgaaggctcgaaggctaagcgagaacaacgatcccagaagcggcaacggaaatga
DBGET
integrated database retrieval system
