Tigriopus californicus (tidepool copepod): 131889620
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Entry
131889620 CDS
T09700
Name
(RefSeq) long-chain fatty acid transport protein 1-like
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tcf01004
]
131889620
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131889620
Lipid biosynthesis proteins [BR:
tcf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
131889620
Transporters [BR:
tcf02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
131889620
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
131889620
NCBI-ProteinID:
XP_059094742
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Position
10:complement(9876824..9882399)
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AA seq
653 aa
AA seq
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MSLIGLVGKRCALWGLILGVLWVLDVLHVVGWPGLLLAAMTVYLMTGGLYTMYLCWHTLP
RDMRGAYRYLRLLYLVYSYQKRNMTVPKAFKERVQAHPNRVCLIHEDTQWTFQDMEDFSN
RVAHYFLRLGYKPGDCVALVMNNCPEYVGLWLGCAKIGMVPALINSNLSGQPLLHSIEAA
SAKVCIYGSDLSSNLKSIAHLIPNVELCSYGSKSNIRDNVTALDRELVNSSVDDVPDSVQ
NCYNFNDKLLYIYTSGTTGLPKAAVIKHSRFYFYCAGMYYLNDMGNIKGHPIFYDPLPLY
HSAGGIVGIGLMMVFGSTVVIRKKFSVRNFWKDCCKYNCNGAQYIGEICRYLLSAPETPE
EKQHSVEIMFGNGLRPQIWEQFTNRFGIHRIGEFYGATEGNSNVLNIDSIPGAVGFVSVL
FPFVYPVRLIRVDESGNVLRDPSGLCVLCQPGEPGEFVGKIVKNHPSRSFDGYVDPAATE
KKIVHNVLKQGDMWFRSGDLLSMDQFGWMYFVDRLGDTFRWRGENVSTNEVEGVLSNILD
QKHTIVYGVEVPGVEGRAGMAAVEEPSGQLNIAEFLVGIKQNLPPYAMPMFVRLVKQLDI
TGTFKIRKMSLQREGYNPNLISDPLFFYDNEKSTYRSLDACLYSDIIQMKFRL
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgattggactcgttggcaaacggtgtgccctctggggcctgatcttgggcgtg
ctctgggttctggatgtcctccatgttgtgggatggccaggactgctgttggccgccatg
acagtctacctaatgaccggaggcttgtacaccatgtacttgtgctggcacactctacct
cgagacatgagaggagcctatcgttatttgcgcttgctgtatctcgtgtatagctatcag
aaacggaacatgaccgtgcccaaggctttcaaagagcgcgtccaagctcatcccaaccga
gtttgtctcattcacgaagacacccaatggacgtttcaagacatggaagacttcagtaat
cgagtggcccactattttttacgattgggttataaacccggcgattgtgtagccttggtc
atgaataattgtccggagtacgtcgggttatggttgggttgcgccaaaattggcatggta
cccgcccttatcaattccaacctctcgggacaaccgctcttacacagtattgaagcggcc
tcggccaaagtttgcatttacggctcagacctcagttcaaacctgaaaagtatcgctcat
cttatccccaatgtcgaactgtgttcatacggatccaaatcgaatattcgggataatgtt
actgccctggaccgtgaattggtcaactcttcggtggacgatgtacccgattcggtccag
aattgctacaatttcaatgacaaattgctctacatttacacctcgggcaccacgggcctc
ccaaaagcggccgtgatcaagcattccaggttctacttctactgcgctgggatgtattac
ctgaacgatatgggtaacatcaaaggccatcccattttctacgaccccctgcctttatat
cattctgccggaggcatcgtgggcattgggctaatgatggtgtttggctccacggtcgtc
attcgtaaaaagttttctgtcagaaacttctggaaagattgttgcaaatacaattgcaat
ggagctcaatacattggagaaatctgtcgctatttgctctctgctcctgaaacgccggag
gagaagcagcatagcgtggaaatcatgtttggaaacggacttcgacctcagatctgggaa
caattcaccaatagatttggaattcacagaataggagaattctacggagccacagaaggc
aactctaatgttttaaatatcgacagcatccctggggcggtgggatttgtgtctgtctta
tttccattcgtttaccctgtacgacttattcgtgtggatgagtctggcaatgtgctacga
gatccttcgggactttgcgttctctgtcaacctggtgagccaggcgaattcgtgggtaaa
attgtgaagaaccacccgtctcgtagtttcgacggatacgtcgatcctgccgccacagag
aagaaaattgttcacaatgtattgaaacaaggcgatatgtggtttcggtctggtgatctg
ctgagcatggaccaatttggatggatgtactttgtcgatcgattaggcgatacctttaga
tggcgaggtgaaaatgtgtctacgaatgaagtcgagggcgttttgagcaatatattggac
caaaaacatacaatcgtttacggagttgaggttcctggggttgagggtcgtgcaggtatg
gctgccgttgaagaaccttcagggcagctgaatattgccgagttcttggttggtataaag
cagaatctaccgccctatgccatgccaatgtttgtgaggctagtcaaacaattagatatc
acagggacctttaaaatcaggaaaatgtcacttcaaagagaaggctacaatccaaatttg
atatcggatcctttgttcttctatgacaatgaaaagtctacctatcgatctcttgatgct
tgcttgtactctgatataattcaaatgaaatttaggctgtga
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