Tigriopus californicus (tidepool copepod): 131889641
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Entry
131889641 CDS
T09700
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1G-like
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131889641
Ion channels [BR:
tcf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
131889641
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
131889641
NCBI-ProteinID:
XP_059094806
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All DBs
Position
1:15927927..16017446
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AA seq
1922 aa
AA seq
DB search
MKRSNSNQIQPFVSRGSSLKEVDDGELLGGEPEDQDYNECEIQVPLLREHREKRSPHIIE
LADAQPPFARRSQFLSPYPNRGRQAILFASSRSPSLVTTRLEPVYPWDLDDDDDEVYTRD
GKNDPPQYGDEDNHHHHHRINNSNRDEDDNDDEEYEHPSLENRKSLSALRRGGYMGESED
DLDNSSLQGESAASFAEFSFRKFSREYWLRKICINIVLNPWFERLTMSVILLNCVTLGMF
QPCEDATCDSKRCQVLKVCDDVIYLYFAVEMCIKMFAMGVAGRGCYLSETWNRLDFFIVM
AGALEYFLDVEKLNLSAIRTVRVLRPLRAINRIPSMRILVMLLLDTLPMLGNVLLLCFFV
FFIFGIIGVQLWAGLLRQRCFIPDDMQDNAVLKSKFFKSQFVPYYQPPDENEKEWICSTP
DSSGMHKCGELPYYEEDEVECHASIETGLYNSSDCINWNQYFTDCKPGAMNPFHGAISFD
NIGLAWVAIFLVISLEGWTDVMYFVQDAHSFWNWVYFVLLIVIGSFFMINLCLVVIATQF
SETKRRETAKMKAERARFQSSSTLSSFTNSETTNCYRQVIRLIAHLIRKAMSRTRRLYRK
HRLEHLSKKEMSLMEKQEAGKLQNHHIRRNVYTQSVINPNNGRCDGRISPDKRAFINQTL
DCSNQSFRPNKNAINSFIAISPGRIAPFYPQLIFQAVIHYVFQYGYLLWFRSYELLALSS
ALSATLTAQIGGFNASQIKHCSTYNLPEVGQSSDDKLGSGCDVDSEIYELAVTPKRPSRF
IAFFGCCGTCLSKFQNQLEKFVDHNIFQRFILFCILINTFSMGIEFHKQPEFLTKTVEIS
NLAFSAIFAIEMLLKLSAYGLFKYISDGFNVFDGIIVIFSSMELYTGFVHGIHPEGGSTG
LSVLRTFRLLRILKLVRFLPNLRRQLVVMLRTMDNVAVFFGLLMLFIFIFSILGMNLFGC
KFCDGDVCDRKNFDTLLWATVTVFQVLTQEDWNIVLFLGMKQTNHWAALYFVTLMTFGNY
VLFNLLVAILVEGFSNQDDKRSSDRNSLYSKDANSGAGLSQSPCQSLHNSSQGGRRGDSL
RGYRRPGSLKANGSGSMVNQMSYAQSPKLSKHVMETLRNNVLEMGEPMQLMLPCSNCGET
RVVMARQIKKEDVECNPVFAEFLQQSKGGSPPNGTMPFRRTSRGSKTSRSSSRSRRRRKP
SKCCSLTESTCSKCEAAIHPLAANSHFTDISKSAVAKNGSNGRANSIHLMENGDNQRDRS
SGCRGVWEMLLYWRKTVLSRWVRFKYERETFSLWIFKPDDKFRMYCQELTGKTWFDFIVL
VFIASNCITLAMERPNIPPWSWERQFLDLLNNIFTFVFFIEMLLKAIATGLLYGEHAYFK
SGWNIMDGSLVIISLVDTVMVVILGQTSKIFGILRVFRLVRALRPLRVINRAPGLKLVVQ
TLLSSLKPIGNIVLICCTFFIIFGILGVQLFKGIFYYCEGPDAHRVKNKTQCLELSGRGN
RWINHKYNFDNLGQALMSLFVLSSKDGWVNIMYQGLDAVGLDQQPRENFNEWRLIYFISF
LLLVGFFVLNMFVGVVVENFHRCRAEQEKEERARRAAKRAKKIEERRRRGPRRKEMMETP
YYIHYSPNRLMVHKMVTSKYFDLAISAVIGLNVITMAMEFYMMPRILANALKVFNYFFTA
VFILEAGMKVSALGLGRYLQDRWNQLDVVIVILSILGIVLEELKSDLMPINPTIMRVMRV
LRIARVLKLLKMAKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVEMFGRLECDDH
HPCQGLGEHAHFRSFGMAFLTLFRIATGDNWNGIMKDTLREECEEGDQCLRNCCVSPYFA
PLFFVVFVLMAQFVLVNVVVAVLMKHLEESHKQQILEFSSMEDDVEVELELEKQLSLARE
MF
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctccaattctaaccaaatccagcctttcgtctctcgggggtcctctttgaaa
gaagtcgacgatggcgagttgttgggcggcgagcccgaagatcaggactataatgagtgt
gaaatccaagtcccgctccttcgagagcacagagagaaacgatctccacatatcattgaa
ttggccgatgcccaacctccatttgcgaggcgatcccaattcctctcgccctatccgaat
cgaggtcgacaggccattttgttcgcatcttcgagaagtccatctctagtgaccactcga
ttggaacccgtctacccttgggacttggacgacgatgatgatgaggtttacacccgggac
gggaaaaatgatcccccacagtacggggacgaggacaaccaccaccaccaccatcgtatc
aacaatagcaatagggacgaggatgacaatgacgacgaagagtacgaacacccatcactt
gagaacagaaagtccctgtcagccctgaggcgaggaggatacatgggcgaaagtgaggat
gatttggacaattctagtcttcaaggcgagtccgctgcaagttttgcggaattctcgttc
cgaaaattttccagagagtactggctccggaagatatgcattaacattgtccttaaccca
tggttcgagcgcttaacgatgtctgtgatcctcctcaattgtgtgactttgggcatgttc
caaccctgtgaagatgctacatgtgattccaagcggtgccaagtactcaaggtttgtgac
gatgtaatctatctgtatttcgcggtggaaatgtgcatcaagatgttcgccatgggcgtg
gcaggcagaggatgctatctgtctgagacttggaaccgcttggattttttcattgtcatg
gccggtgcccttgaatatttcctcgacgtggaaaagctcaatttgtcagccattagaacc
gttagagttcttagaccacttcgtgctatcaatcgcatcccaagtatgcggattttggtg
atgttactcctggacacattgcccatgctgggtaacgttttgctcctttgtttcttcgtc
ttcttcatatttggtatcatcggggtccaactttgggcgggactgcttcgtcagaggtgc
ttcatccccgacgacatgcaagacaacgctgtgctgaagagcaaatttttcaagagtcaa
tttgttccctattaccaacctccagatgagaatgagaaggagtggatctgttccacgcca
gatagttcgggtatgcacaaatgcggggagttgccttactacgaagaagacgaggtggag
tgtcatgccagcatcgaaaccggtctttacaactcatcggattgcattaattggaatcaa
tacttcaccgattgcaaaccaggagccatgaacccgttccacggtgcaatatcctttgac
aatattggattggcctgggtggccattttcctggtgataagtctcgaaggatggaccgat
gtcatgtatttcgttcaagatgcgcactcattctggaattgggtctactttgtcctgctc
attgtgattggctccttcttcatgattaacttgtgcctggtcgtcattgccacccaattt
tcggaaacgaagcgtcgcgaaacggcaaaaatgaaggctgagcgagctcgatttcaatca
tcgtccacattgtcgagcttcaccaattcggagaccaccaattgctatcgtcaagtgatt
cgactcatagctcatctgatccgaaaggccatgagtcgaacacgacggctgtatcgaaag
catcgcctcgagcatttgagcaagaaagagatgtcgctcatggagaaacaggaggcgggc
aaacttcaaaaccatcacatccgacgcaatgtctacacgcagagcgtcatcaatcccaac
aatggtaggtgtgacggtagaataagcccagacaaaagagctttcattaatcagaccttg
gattgttcaaaccagtcctttcgaccgaacaaaaatgctattaattctttcatagccatt
agtccaggccgaattgctccattttatcctcaactgattttccaggctgtcattcattac
gtgttccaatacggttacttactgtggtttagatcatacgaattgctcgcactttcatca
gcactctctgccactctcactgcccaaatcggagggtttaatgcctcacaaatcaagcac
tgttcaacctataacttgccggaggtgggacagagctcggatgacaaattgggatcagga
tgtgatgtggatagcgaaatctacgaattggccgtgacgcccaaacggccctcccggttc
attgccttcttcgggtgctgcggtacctgtctgtccaagtttcagaatcagctcgagaag
tttgtggatcacaacattttccaacgtttcatcctgttttgtattctcatcaacaccttc
agtatgggcatagagttccacaaacagccggagttcctcacgaaaaccgtggaaatcagc
aatctcgcttttagtgccatctttgccatcgagatgctcctcaagctatcagcttacgga
ctctttaagtacattagcgacggctttaacgtgttcgatggaatcattgtcatattcagt
tccatggagctttatacgggatttgttcatggaatccatcctgaaggtgggagcaccggc
ctttccgttctgaggacgttcagacttctgcgcatcctcaaactcgtccggttcttaccg
aatcttcggcgccagctcgtggtgatgctgaggaccatggacaatgtggccgttttcttt
ggactgctcatgctcttcatcttcatttttagtattttggggatgaacctctttggatgc
aagttttgcgatggggacgtctgtgatcgtaaaaactttgatacgctcctttgggccact
gtcaccgtgttccaagtcctgactcaagaggattggaacattgtcctctttcttggcatg
aaacaaacaaatcactgggcggcgctgtatttcgtcaccctgatgaccttcggcaactac
gtcctattcaaccttctggtggccattttagtggagggattctccaatcaagacgacaag
cggagctcggatcgaaactcgttatattccaaggatgccaatagcggagcaggcttgtcc
caaagtccttgtcaaagtctgcataattccagtcagggaggcagacggggcgacagtctc
cgaggatatcgacgaccaggcagcctcaaagccaatggcagcggctccatggtgaaccag
atgtcgtatgcccaatctccgaaattaagcaaacatgtgatggaaaccctgcggaacaac
gttctagagatgggcgagcccatgcagttgatgcttccctgttccaattgcggtgagacg
agagtggtgatggctcgtcaaatcaaaaaagaggatgtggaatgcaatccggtatttgca
gagttccttcaacaatccaagggtggttcgccacccaatggaacaatgccattcaggcgc
acttccaggggctccaagacatccaggagcagcagtaggagtcgccgtcgtcggaagccc
tcgaaatgttgctcactcaccgaatccacgtgcagcaaatgtgaggcagccatccatcca
ctggctgcgaattcccatttcacggatatttccaaatctgcggtcgccaagaacggttcc
aacggacgggcgaattccattcatttgatggagaacggtgacaaccaacgtgacaggtcg
agtggttgtcgaggcgtgtgggaaatgcttttgtattggcgaaaaaccgtcttgtcccgg
tgggttcgattcaaatacgagcgagaaacattctcgctttggatattcaaacccgatgac
aaatttcgaatgtattgccaagagctaaccggcaagacatggttcgatttcatcgtgttg
gtattcattgccagtaactgcatcacactagcaatggagaggcccaacattcctccctgg
tcttgggaaaggcagttcctagatctgttgaataacatcttcacgttcgtgtttttcatt
gagatgttattaaaagccattgccacagggttgctctacggagagcacgcttacttcaaa
tccggttggaacatcatggacggatcgctggtgatcatttctttggtggatacggtgatg
gtggtgattttgggtcaaacatctaaaatcttcggcattctacgcgtctttcgattggtt
cgagccctgcgacccctgagggtgatcaatcgggcccctggtcttaaattggtggtccaa
acattgctttcatctcttaagccgattgggaatattgtcttgatatgttgcacatttttc
atcatctttggtatcctgggcgtccagttgttcaagggcatcttctattattgcgagggt
ccggatgctcatcgggtgaaaaataagactcagtgcctagagttaagtggtcgcggcaat
cgttggatcaatcacaagtataacttcgacaatctgggacaggctctcatgtcgttgttt
gttttgtcctccaaagatgggtgggtcaacatcatgtaccaaggcctcgatgccgtggga
ttagatcaacaacctcgagaaaattttaacgaatggcgcctcatctacttcatctcattc
ttgctgctggtgggattctttgtgttgaacatgtttgtgggcgtggtggttgagaacttc
catcgatgtcgggccgagcaggagaaggaggaacgggcccgcagagcggccaagcgggcc
aagaaaatcgaagagcgacgtcgaaggggacctcggcggaaagaaatgatggagacgcct
tattacatccattactcgcccaatcgcctgatggtccacaaaatggtgacctccaagtac
ttcgatctagccatctcggccgtaattggactcaatgtgataactatggccatggagttc
tacatgatgccccgaattttggccaacgctttgaaagtgttcaactacttctttacggct
gtgttcattctcgaagctggaatgaaggtttccgccttaggattgggacgatacctccaa
gaccggtggaatcaactcgatgttgtgatagtaatcctctccattttgggcattgtactt
gaggagctcaagtcagatttgatgccgattaaccccacgattatgagggttatgcgagtg
cttcgaatagcgagagtgctcaagctcttaaaaatggccaaaggcatacgtgctctactc
gatactgtgatgcaagcgcttccacaagttggaaatcttggactcctcttcttcctcctt
ttcttcatattcgctgcactcggcgtggaaatgtttggccgattggaatgtgatgatcac
cacccgtgccagggcttgggcgagcacgcccacttccggtcctttggcatggccttcttg
accttgttccgcattgccacaggcgacaattggaatggcatcatgaaagatacgctccgt
gaggagtgcgaagagggtgaccaatgtctacgcaactgctgcgtctcgccctactttgcg
cccctgttcttcgtggtctttgtcctcatggcacagtttgtgttggtcaatgtggtggtg
gccgtgttgatgaagcatctggaggaatcacacaagcagcaaattctggaattcagcagt
atggaggacgacgtggaagtggaattggaactggaaaagcaactctccttagctcgtgag
atgttctag
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