Tigriopus californicus (tidepool copepod): 131889662
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Entry
131889662 CDS
T09700
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131889662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131889662
Spliceosome [BR:
tcf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
131889662
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
131889662
NCBI-ProteinID:
XP_059094798
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Position
1:3401097..3403225
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AA seq
641 aa
AA seq
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MPQSSTAPMGRFAPNTLSQLEPQIHKEIKGVLGFSEPTLLQAALNAIQAGGQEQAIESEC
GSSLVKIRSRGRLSTMLESRKAQKLSRKIYGAVDEFCVTHELPRPAGEESDRGSRKRKAD
QDEGEATVAKKPVEGSMAAMSAEQIRAIMSNTKKQIEERKRQLQVSLAAAKPALGQPTSG
VVGPQKPAPADASEDKFKSIAALQAQIQSRMEKMKLPVATGPTSLILDAEGRTVDASGQE
IQLTQHVPTLKANLRAKKRDEMKEHLKEGPGVVQVDQESKFFDPRVVGKGVATRAHKRAF
RFNEPGKFQNEGNRLRMKAQLEKLQADIASVARRTGISSATQLAKLVPKEAEKGRIPEVE
WWDSHLMHPDSTYAEPVFREGAITNLIEHPIQLKPLESSQPEQIPVYLTKKERKKLRRQN
RREAEKEKQDKIRLGLVNPDEPKVKMSNLMRVLGTEAVQDPTKIEAHVRAQMAKRLDTHE
KANAERKLTPEERKAKVRRKLEEDTSFGVHVSIYRIKSLMNPAKKFKVMTNANQLTMSGC
VVYYEDVNVVVVEGGPKQQKKYKQLMLNRIKWDEETYKRSDGTEADNGCTLVWEGQTKER
HFKEMMIKQCPSESFARDFFRKFQVEHFWDLAYSASVQDDL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagagctccaccgcacccatgggccgctttgcccccaatacgttgagccaatta
gagccgcagattcacaaggagatcaagggcgtgctgggtttctcggagcccacactgctg
caagccgctttgaacgccattcaagccggaggtcaagaacaggccattgagagtgagtgc
gggtcaagtctggtcaaaatcaggtccaggggtcgtttgtccaccatgttggagtcccgc
aaggcccaaaaattgtcccgcaagatttacggggccgtggacgaattttgcgtgacacat
gagctgcccagacccgcgggggaggagtcggatcggggatcgaggaagcggaaagccgat
caggatgagggtgaagccacggtggccaagaaaccggtggaggggagcatggccgccatg
tcggctgagcaaattcgagccatcatgtccaacacgaagaaacagattgaagagcgcaaa
cgccaactgcaagtgagtttggcggcggctaaacccgctttgggtcaacccaccagtggg
gtagtgggtccgcaaaaacccgcaccggccgatgcatcggaagacaagttcaaatccatt
gcggcgctgcaagcgcagattcagagccgcatggagaagatgaagctccccgtggccacg
ggtcccacatccttgattctggacgcggaaggccgaaccgtggatgcctccggtcaagaa
atccaattgacgcaacacgtgcccactttgaaggccaatttgcgggccaaaaagcgcgat
gagatgaaggagcacctgaaagaaggcccgggcgtggtccaagtggatcaagagtccaaa
ttctttgatccacgtgtggtgggtaagggcgtggccacgcgggctcacaaacgagctttt
cgcttcaatgaacccggcaagtttcaaaacgaaggcaaccgtctgcgaatgaaagcgcaa
ttagaaaagctccaggcagatatcgccagtgtcgcccgacgtacggggatctcgtcggcc
actcagttggccaagctcgtgcccaaagaggccgaaaagggtcggatcccggaggtggag
tggtgggactctcacctgatgcacccggactccacgtacgccgagccggtgttccgcgaa
ggagccatcaccaatctgatcgagcaccccattcaactcaaacccttggaatcatcccaa
cccgagcagatccctgtgtatctcaccaagaaagagcgcaagaaacttcgccgacagaat
cgccgcgaagctgagaaagagaaacaggacaagatccgtttgggcttggtcaacccggac
gagcccaaggtcaagatgtccaacttgatgcgggtcctcggcaccgaagccgtccaggac
cccaccaagatcgaggctcacgtccgggcccaaatggccaaacgtctcgacacccacgaa
aaggctaatgccgagcgcaaactcactccggaagagcggaaagccaaggttcgacgcaag
ttagaggaggacacgagtttcggggtccacgtgagcatctaccggatcaagagcctcatg
aatccagccaagaagttcaaggtcatgaccaatgccaatcagttgaccatgtccgggtgc
gtggtctactacgaggatgtgaatgtggtggtagtggaaggcgggcccaagcagcaaaag
aaatacaagcaactcatgctgaaccggatcaaatgggacgaggagacctacaagcgatcg
gatggcacggaagccgataatggatgtaccttggtgtgggaaggtcaaaccaaggaacgc
catttcaaagagatgatgatcaaacaatgcccttccgaaagctttgcccgcgattttttc
cgcaagttccaggtcgaacatttttgggacctggcttatagcgcgtccgtccaggacgac
ttgtaa
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