Tigriopus californicus (tidepool copepod): 131889684
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Entry
131889684 CDS
T09700
Name
(RefSeq) lamin-C-like isoform X1
KO
K07611
lamin B
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
131889684
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tcf04812
]
131889684
Cytoskeleton proteins [BR:
tcf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
131889684
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
PDZ
PDZ_6
PDZ_2
Syntaxin
DUF948
Motif
Other DBs
NCBI-GeneID:
131889684
NCBI-ProteinID:
XP_059094820
LinkDB
All DBs
Position
10:15266855..15278577
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AA seq
724 aa
AA seq
DB search
MGVQLRPRTITVDRGSRGFGLSLIYRGLDKYEEKDTGIFVARVVPGGQAARYGVRENDKI
VTINSKTPRNVDDAVAVIKQAGNQIKLVVLREEEMPDIQVEDSSSIGEADSTWASDALDI
MRDTLGQQPISRSGSARSFNTTFGPPGNATPSPRLQRAQGPHATGSFSGGSQVNTPTSPS
AVNKQQDFARQQAEYRARQEAAERARQQQLQQYQQQQETARQLARQDGNPVSVKDTVRDM
ISNSDFSNFDVRPRSNSATRRVIQNGRDDQETKKSTENITRIVETMHRPGTSQSGRYKST
NSLHDLGLDNYPNPEYPEASRLSRKEEKQSLQNLNNRLAGYIDRVRQLQQENAKLVHQVR
TVEEYQSKEITNVKDIYDKQINDLKGGLESMNKQYNQLKVGAEGLLSENEDLKERLNKKD
RDLLNANNHANALEDEVRELSSRMKKLEQDRQRAQDELKDALPELDVLRKKLADLKRVLD
DEQLKKADLENQCARLEEDLKFKLQLLEKELTEVKHRKEIEINEMDGKLQEEYELRLQKA
LEELRGVYDKQMKQSREDFAKLYDNRIQDLQGQLTKERGANASSSQELKESRGRIEALIS
KVSDLEGANLALNQKIADLAQDMEDQKAAHRAQMAAKDDEIKRLLDELAHQLKEYQNLQD
LKVQLDMEIAVFKSLIESEEDRLGLGDRSLDLSDSSDSHSRTKVEHKKESSSFQRKVTVS
QTQL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgggggttcagcttcgcccacggaccataaccgtggatcgtggatcccgaggattcgga
ttgtctttgatctatcgtggtttggataaatacgaggagaaagacacgggtatctttgtg
gcccgagttgttcccggaggtcaagccgctcggtatggcgtccgtgagaatgacaagatc
gtgacgatcaattccaagaccccgcggaatgtggacgacgcggtagccgtgatcaagcag
gctggtaatcagatcaagttggtggttcttcgagaggaagaaatgcccgatattcaggta
gaggacagctcctccattggcgaggccgattcgacatgggcaagtgatgcgttagatatc
atgcgggacacccttggacaacaacccatttctcgatccggctcggctcgctcgttcaac
acgaccttcggcccgcccggcaacgccacgccctcgcctcgacttcaacgagctcagggg
ccccatgccacgggcagtttcagtgggggaagtcaagtgaacacgcccacctcaccctcg
gccgtgaacaagcaacaggactttgctcgtcaacaagcagagtatcgggcccgccaagag
gctgccgagcgggctcgtcaacaacaactccaacagtatcaacaacagcaggagaccgcc
cgacagttggcccgccaagatgggaacccggtgtcggtgaaggacacggttcgcgatatg
atcagcaactcggacttcagtaactttgacgtccgaccccgctccaacagcgccactcga
cgcgttattcagaacggtcgagacgaccaggaaacgaagaagtcgacggagaacatcaca
cggattgtggagaccatgcatcggccgggaacgagccaatcggggcggtacaagtccaca
aatagcctccatgatctgggcttggacaactatcccaatcccgagtatccggaggccagt
cgcctgtccaggaaggaggagaagcaatcccttcaaaacttgaacaaccgcttggctggt
tacatcgatcgtgtgcggcaactgcaacaagaaaatgccaaactggtccaccaagttcgg
accgtcgaggagtaccagagcaaagagatcaccaatgtcaaggacatctatgacaaacaa
atcaatgatctcaagggaggtctggagagcatgaacaaacaatacaaccagctcaaggtc
ggagctgagggattgctatccgagaacgaagatctcaaagaaaggttgaacaagaaggat
agggaccttttgaacgcaaataatcatgccaatgcattggaggacgaggtccgagaactc
tcgagtcgaatgaagaagttggagcaagaccgtcaaagggctcaggacgagctgaaggat
gccctgcccgaattggacgttctgaggaagaaattggccgatttgaagcgcgttctcgac
gacgagcaactcaagaaggccgatctggagaaccaatgtgcccgattggaagaggatctc
aagttcaagctccaattgttggagaaagaattgaccgaggtcaagcatcgaaaggaaatc
gaaatcaacgaaatggatggcaaacttcaagaggagtacgagcttcgtcttcaaaaggct
ctggaggagcttcgcggggtgtatgacaagcagatgaagcagagcagagaggactttgcc
aaactttacgataacagaatccaagatctccaaggtcaattgactaaagagagaggagcc
aatgccagttccagtcaagagctgaaggagtctcgaggtcgcattgaggccctcatcagc
aaggtctccgacctggaaggcgccaatctggctctgaaccaaaagatcgccgacctagct
caggatatggaggaccagaaggcggcccatcgcgcccaaatggccgccaaggatgacgaa
atcaagcgtcttttggacgagttggcccatcaactcaaggagtaccagaacctccaggat
ctcaaggtccaactcgacatggagattgccgtgttcaagagcctcattgagtcggaagag
gaccgcctcggtctcggggatcgttcgttggatctgagcgattccagtgattcgcattcg
cgaaccaaagtggagcacaagaaggagtcgtcgagtttccaacggaaagtcaccgtctct
caaactcaactttaa
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