Tigriopus californicus (tidepool copepod): 131889699
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Entry
131889699 CDS
T09700
Name
(RefSeq) peroxisome assembly protein 12-like
KO
K13345
peroxin-12
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
131889699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131889699
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
131889699
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-rbx1
PHB_depo_C
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
131889699
NCBI-ProteinID:
XP_059094845
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Position
10:1793390..1795733
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AA seq
329 aa
AA seq
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MAQANFINAGVTSTSSPRPSIFQLLASGGLHRSICPAFEHILRLLKTRHHSSQALDLLYK
YCDEFWLLIDLSLESYYLKTYNALFSEHFYGLTRSFKSNQRHPILRSLLFSVILPYVKRK
LDRVFESLRESVADGVPTSKILEFSRLYFVRVYPYIHMIYEGLHLFLAIAYTLGRSSYHQ
LSTQLAGLTLTQITTEAQSQFQERELKSRNSAQILPKIIRSFAQTLTFGLETGSFILQFF
NHWQSRTEHIQMGPTSDIPDPPEIDPEISKTTCPICHGPRRTETLLSISGYVFCYVCVVK
YLRQHGKCPITNFPANEDSLIRLYSQESS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagccaattttatcaatgcaggagtcacatccaccagtagcccaagaccctcg
atattccagttgctggcctcaggtggtcttcatcgttcaatttgtccggcatttgagcac
atactcagattattaaaaacgcgacatcattcatctcaagctctggatttgctttataaa
tattgcgacgagttttggttattgatcgatctgtccttggagagttattacctgaaaacc
tacaacgctctattctcagaacatttctacgggctgacccgatccttcaagtccaatcaa
cggcatcccattcttagatccctactcttctccgtgatcttgccatacgtcaaacgtaaa
ctggatcgagtcttcgaatccttacgagaatcagtggccgatggagtccctacgtcaaaa
atactcgagttttctagattgtattttgtgcgagtctacccgtacatccatatgatctac
gagggtcttcatctcttcctcgctattgcgtacacattgggtcgatcatcgtatcaccaa
ttgtccactcaattggcggggttgacccttacccaaatcaccacggaggcccaatctcaa
ttccaagagcgggagctaaaatctcgaaactccgctcaaattttacccaaaatcattcgt
tcgttcgcccaaactctcacctttggccttgaaacaggatcatttatccttcagttcttt
aatcattggcaatctcgaaccgaacacattcaaatgggtccaacctctgatatccctgac
cctcccgagatcgatccggagatttcaaagaccacgtgtcctatttgtcacggacccagg
agaacggagacactactctccatctccggatatgtgttctgctatgtttgtgtggtgaag
tatctccgacagcacgggaaatgtccaatcacgaatttcccagccaatgaagactcccta
atccgactttactcacaagagtcatcatga
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