Tigriopus californicus (tidepool copepod): 131889717
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Entry
131889717 CDS
T09700
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131889717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcf03009
]
131889717
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
90S particles
GTPase
131889717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
GTP_EFTU
MMR_HSR1
AAA_14
AAA
AAA_22
RNA_helicase
ABC_tran
TAFH
Motif
Other DBs
NCBI-GeneID:
131889717
NCBI-ProteinID:
XP_059094865
LinkDB
All DBs
Position
10:complement(5557740..5561693)
Genome browser
AA seq
1218 aa
AA seq
DB search
MEEATAQQKGHIKSGKGQKAAGRKKQQLKKEGVSESDARKRNPKAFAIQSVAKTERRVRR
KEDITEKRAQVPTVDHTPVDPPPMVVAIVGPPKVGKSTLLKGLIRNYTKQTLSSIQGPVT
IVAGKKQRITFIEVSNDLNAMIDAAKVADLALIMVDASFGFEMEVFEFLNICQVHGFPRI
LGVLTHLDTFTNAKTLRRTKKIMKHRFWTEVYQGAKLFYLSGTIHGEYQKTEVHNLGRFV
SVMKLRPLVWREAHPYLLADRMEDITNPEDVRFNAKCDRSISLYGYVRGTSFKNHTSVHI
PGCGDFPISDIMFLPDPCPLPHTLKKASLSEKDKSIYAPMSGVGGIVYDKDGVYIDLGGS
HSHNHQKPLKEEVYDPSNEMVASMIDSQKTLDEKMESSELKIFSESAPIKSQDIEEEKTI
EQPGDRIRRKAVFDTDDNDIALESDEDADEVDTPKTSSKLNHKNKSLMREMGLSSDDEES
DSDLDLEDEDESDTEVEPARPKKGKLAKLNKESSVKSVDNVMKSKITETLSQIGKSSQKK
EIDSGHATEENDSDIADESDDEDLREPDKESDGTEEELDDNIDADEETEVDKTAWKEDML
KQASQSFYDRLSNTTSLNKMVYGQRNQGDQDDTEVNEDDQIGGLFKVIKQNQENKASHSA
VMNQIDSTQFVVDKLQNWEIEEICDSIRDCFVTGKWKESEDAEALLGLDDEEDDFDMDGD
FEDLETGQVHQAKSNGSAKDEEDEGPRVIEDEKELRKKRLEKKRQLKMQFNNDYDEGGGD
RAYQEELKKEVDHQTMLNRNEFEGMEDSLRVQFEGFRPGMYVRVELRSLPCEMVTHFDPT
YPIVLGGLQTGEDQIGYVQVRFKKHRWYKKILKNRDPLIMSLGWRRFQSMPIFSITEHNM
RHRMIKYTPEAMHCDAHIWAPITPQGTGILAVQQVNEIDARFRIAATGVVLEMDKSAQVM
KKLKLTGEPYKIFKKTAFIKGMFNSSLEVAKFEGAAIKTVSGVRGQIKKSLSEGEGHFRA
TFEDKILMSDIVFVKTWFTVEIPKFYATVTNLLLPPEQKLKWKGMRTVGEIKRAKSIMAT
PNPDHLYTEIKRQPKVFNELQVPRNLQKELPYHLKPKFVSKGREFNAERVHVELDSKEKK
VRNLMKMLSTVANDKADKLQKDKSKRIQDLIRRKVAIEEKKFKRQKEARRQVSRTLSKSQ
AQKERMDSRRGGKRSHDD
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggcgacggcccaacagaaaggccatatcaagagcggcaaaggccagaaggcc
gcgggtcggaagaagcagcaattgaagaaagagggcgtgagtgagagcgatgcccgcaaa
cgcaaccccaaggccttcgccattcaaagcgtggccaagaccgagcgacgcgtccgacgc
aaggaggatatcaccgagaagcgcgctcaagtgcccactgtcgaccacacccccgtggat
ccgccgcccatggtggtggccatcgtgggaccgcccaaagtgggcaaatccacgctgctc
aagggcttgatccgcaactataccaagcaaaccctgagctcgattcaaggccccgtcacc
attgtggccggcaaaaagcagcgcatcaccttcatcgaggtctccaacgacctgaatgcc
atgattgatgcggccaaagtggcggatttggccttgatcatggtggatgcttcgttcggc
tttgagatggaggtctttgagtttctcaatatctgccaagttcacgggtttcctcggatc
ttaggcgtgctcactcacttggacacgttcaccaatgccaagacactgagacggaccaag
aaaatcatgaaacatcggttctggaccgaggtctatcaaggcgccaaattgttctattta
tcgggcacgattcacggcgaataccagaaaacggaagtccataatctcggccgctttgtg
tctgtgatgaaacttcgaccgctggtctggcgcgaggctcatccgtacttgctcgccgat
cggatggaggatatcaccaatcccgaagatgttcgcttcaatgccaaatgcgatcggtcc
atttctctgtacggttacgttcggggcaccagtttcaagaaccatacctcggttcacatt
ccgggatgcggggatttccccatttctgatatcatgttcttgcctgatccgtgcccattg
ccgcacacgttgaaaaaggcatccctgagtgagaaggacaagagcatttatgcacctatg
tcgggtgtgggtgggattgtgtatgataaagatggagtgtacatcgatttgggaggtagt
catagtcataatcatcagaaaccgctgaaagaagaggtttacgacccatcgaatgagatg
gtcgcatccatgattgacagccagaagactttggacgagaagatggagagcagtgagttg
aagatcttttccgaatccgcgcccatcaaatcccaagatatcgaggaagagaaaacgatc
gagcagccaggcgaccgaattcgacgaaaagctgtgtttgataccgatgacaatgatatc
gcattggaatcggacgaagacgcagacgaggtcgatacccccaaaacaagctcgaagctt
aaccataaaaataaatcattaatgagagagatggggttaagttcggacgatgaggagagc
gacagtgatttagatttggaagacgaggacgaatccgataccgaagtcgagccagcacga
cccaaaaagggaaaattggccaagttgaacaaggagtcgtccgtaaaatcggtcgataat
gtcatgaaatcgaagatcaccgagactctgtcccaaattgggaaatcgtcccaaaaaaaa
gagattgacagtggtcatgcgactgaagaaaatgattcggatatagcggacgaaagtgat
gacgaggatctcagagagccagacaaagagagtgatggaactgaagaagagctcgacgac
aatatagacgcagatgaggagaccgaagtggataagacggcctggaaagaggatatgttg
aaacaggcctcacagagtttctatgataggttgtcgaatacgacatcactgaacaaaatg
gtgtacggtcaaagaaatcaaggcgaccaagacgataccgaagtgaatgaggacgaccaa
attgggggactgtttaaggtcatcaaacagaatcaagagaacaaggccagtcactcggcc
gttatgaatcagatcgattccacgcaattcgtggtggacaagctacaaaattgggaaata
gaagaaatatgtgactccattcgagattgcttcgtgacggggaaatggaaagagtccgag
gatgccgaggctctgttgggcctagatgacgaagaagacgattttgacatggatggagat
tttgaggatctcgaaactggccaagttcatcaagccaaatcgaatggatcggccaaagat
gaagaggatgaaggaccccgtgtgatcgaggatgagaaagagctgaggaagaaacgtcta
gagaagaagcgtcaattgaaaatgcaattcaacaacgattacgacgaaggtggcggggat
cgagcttaccaagaggagctgaagaaggaggtggatcaccaaaccatgctgaatcggaat
gaatttgaaggcatggaagactctctaagggttcaattcgaaggttttcgaccgggtatg
tacgtgagggtggaacttcgctcattgccttgcgaaatggtgacccatttcgatcccacc
tatcccattgtattaggcggtcttcaaacgggtgaagatcagatcggttatgttcaagtc
aggttcaagaagcatcgttggtacaagaaaatcctcaaaaaccgagatcccctgatcatg
tccttgggctggaggcgatttcaatccatgcccatcttctccatcaccgagcacaacatg
cggcatcgcatgatcaagtacacgccagaagcgatgcattgcgatgcccacatttgggcc
ccgatcacgccccaaggaacgggaattttggccgttcaacaggtcaacgagatcgatgcc
cgttttcgaattgcagccacgggcgtggtcttggaaatggacaaatccgcccaggtcatg
aaaaaactgaagctcacgggtgagccttacaagatcttcaagaagactgctttcattaaa
ggcatgttcaactcgagcttggaggtggccaagtttgaaggggcggccattaaaactgtg
tccggcgtgcgaggtcaaatcaagaaaagcctttcagaaggagagggccatttccgagcc
actttcgaggataagatcctcatgagcgacattgtgttcgtcaagacttggttcaccgtt
gagattcccaagttctatgccacggtcaccaacttattgttgcctcctgagcagaaattg
aagtggaagggtatgcgaacagtgggtgagatcaaacgagccaagagcattatggccaca
cccaatccggaccatctctacacggagatcaaacgccagcccaaggtgttcaacgagcta
caagtgcctcgtaatcttcagaaggaacttccctatcatctgaagccgaagtttgtgagc
aaaggtcgtgagttcaatgccgagcgtgttcacgttgaactggactcgaaggagaagaag
gtgcggaatctcatgaagatgctcagtactgtggctaacgataaggccgacaagttgcaa
aaggacaagtccaaacgcatccaagacttgatccgacgcaaagtggctatcgaagagaag
aagttcaagagacagaaggaggctcgcagacaagtgtcgagaactttgagcaagagtcaa
gctcaaaaagagcgaatggattcgcgccggggtggcaaacgctctcatgatgattaa
DBGET
integrated database retrieval system
