Tigriopus californicus (tidepool copepod): 131889762
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Entry
131889762 CDS
T09700
Name
(RefSeq) serine/threonine-protein phosphatase PP1-beta catalytic subunit
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131889762
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tcf01009
]
131889762
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcf03021
]
131889762
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131889762
03041 Spliceosome [BR:
tcf03041
]
131889762
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
131889762
Protein phosphatases and associated proteins [BR:
tcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
131889762
Transcription machinery [BR:
tcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131889762
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
131889762
Spliceosome [BR:
tcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
131889762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
131889762
NCBI-ProteinID:
XP_059094918
LinkDB
All DBs
Position
11:9099202..9102000
Genome browser
AA seq
334 aa
AA seq
DB search
MADGEINIDNIIQRLLEVRGSRPGKTVHMTENEVRGLCLKSREIFLQQPILLELEAPLKI
CGDIHGQYTDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLEAICLLLAYKIKYPENFFLL
RGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQ
SMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDL
DLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEK
KAKYQYQGLSGTGRPVTPRGPTAGPMTGSGMKRK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggccgatggcgagatcaacatcgataatatcatccaacgactcttggaagtccgcggt
tcccgtccgggcaagacggttcacatgaccgagaacgaggtccggggattgtgcttaaaa
tcccgggaaatatttttgcagcaacccattctgctcgagttggaggcgcccctcaagatt
tgcggcgacattcacggacagtacacggatctgctgcgtttgttcgaatatggcggcttc
ccgcccgaatccaactacctcttcttgggcgactacgtggatcgtggcaagcaatccttg
gaagccatctgtttactactagcatacaagatcaagtacccggaaaactttttcctcctc
cgaggcaatcacgaatgtgccagtattaaccggatctacggcttctacgatgaatgtaaa
cgacgattcaacatcaagctgtggaagacgtttaccgattgcttcaattgcttgcccatt
gccgccattgtggacgaaaagatcttctgttgccacggcggcttgagtccggaccttcag
tccatggagcagattcgacgcattatgcgacccacagacgtgcccgacaccggcctactc
tgcgacttactctggtccgaccccgacaaagatgtccaaggctggggggaaaacgatcgc
ggcgtctcgttcacctttggagctgatgtggtgtcgaaatttctgaaccgacatgacctg
gacttgatatgtcgagctcatcaggtggtcgaagatgggtatgaattctttgctaaaagg
caattggtcacactcttctcggctcccaattactgtggcgagttcgacaacgctggtggc
atgatgtccgtggatgaaacgctcatgtgctcctttcagattctgaagccaagtgagaag
aaggcgaaataccagtatcagggacttagtggaacgggtcgacctgtgacccctcggggt
ccaactgcgggtcccatgactggatcgggtatgaaacgaaagtga
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