Tigriopus californicus (tidepool copepod): 131889784
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Entry
131889784 CDS
T09700
Name
(RefSeq) nuclear pore complex protein Nup133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131889784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131889784
03036 Chromosome and associated proteins [BR:
tcf03036
]
131889784
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131889784
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131889784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
131889784
NCBI-ProteinID:
XP_059094944
LinkDB
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Position
11:complement(9930717..9942038)
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AA seq
1234 aa
AA seq
DB search
MPLSAVDCELALEDLCECSSDWINYTGKKCDKGELRPDILENLELSYFIGLHLCPMFGSP
IPTSSAASTSGVGGSGSSLFGHGHRARQGGARKSMGGAFTPFKTPRSHLNRSVRAGGGVS
SANTSLAPSQILESCESHSVLASTVSSPVLVTEILTLAEKPTDVSVSLSAEGWAWLVHGR
RLVVWRYKVASGQRSLNAACRELTLPASDVAHHARLINVFAWHENQTPSCLAVSPEGLVR
FWPNIAHPSSSTEVSADLQGQECHSLTDLQPLGSVLATTTSTIVLVHVLNVGGQHKIVCR
QLKPPHGLLGGIGRRVSSLFWGGMPATGEAKLVRVLTSNVKSASSQVTFVLTTMGLQKWI
LESDTQERLLYEWPVQSQGAETFMKHSMKNEECDIGSLRVCTLDMQFTPKGELAILMAAM
NAHSPQQVFYGIGMVDCSTEEQPTEFKNIIAFKPSDGSKDQNITSLGYKLMFPNKKYAYI
FNNEGIICVPAQGDGNENDFFDFSTGGNAILGAKSVDGKPYFFAANQGLVHLAVNQNMSV
LEPSMTSFNESVSGFDPMTPKKLSESINMSAISQTGLDNLSISESKSDQLKAAFLLFCKR
NLTKSASIIESLFPSDNMRSEIDSSVDKLVLSISKDLIDDFPASDPRWMESVPASEATLG
QGTMGATMSLLILHQLEDKQTALEFFVSFLKEVGLWNKLCGVTIRETPIPTSLVLCEQVE
KTAAAIALRTIHSEHQSLVDKAIERVVRHRKVVLERGLTSQDHFYREISRVHEIFDGLQA
LQDELLLSQTPREIVNALIAINTIFQRVLKDALQVREKKALEFSPPKSLIEEMEYIPWSS
APGPKGLRTALINQVKISMEKGLSLAENKATRVEIVKQVVHLIDFILDGFLCQLNKTKEA
RRPVVLKQYEKNRSELISTLVSKGYLEEATSLAEKYLEFVALIKICEITKNRARLDGYME
EFAEHDFSSFHFDWLVREGKQGMLLSQTSSSRHGELGKFLKGHSNISWLHDIQIGDFGKA
SYTLGNLGKHETDLIARKKTILSLAKLAALASDESDENILKSVNDVEDQLMVLDAQEQLP
KSVMDAFKFDSESMHVLAAREIIELYIGDENIQGDHIDFKKALDLLDFVNVVDEEEMTAL
RLHIWSKAILKDSWVDFDVDNPLEAVKETVCFKLIEFCYIQGADLSTLVPSVEEILSADE
LSGLAKNRNFQFLLQTGYEHITRVCQEESDKMDS
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgccgctctctgccgttgattgtgaattggcacttgaggacttgtgtgagtgctcgagc
gactggattaattacacggggaagaagtgcgacaagggtgaacttcgccccgatatcctt
gaaaacctcgagttatcgtatttcattggccttcatttgtgccccatgttcggttcaccc
atcccgacctcgtcggccgcctcgacctcaggggtcgggggctcaggttcgtccttgttt
ggccatgggcatcgcgctcgccagggcggggctcgcaaatccatgggcggtgctttcacg
ccctttaaaaccccgcgctcccatctcaaccgcagtgtccgggccggtggcggcgtgtca
tcggccaacacgtcgctggcgccctcgcagatcttggagtcgtgtgaaagccacagcgtt
ttagctagtacggtttcatcgcccgtacttgtgacggagattctgaccttggccgagaaa
cccaccgatgtaagcgtatcgctgtcagccgagggttgggcttggttggtacacggtcgt
cgcttggtggtgtggcggtataaggtagccagtggtcaacggagcttgaatgcggcttgt
cgcgaactaaccttgcctgcatcggatgtggcacatcacgctcgattgatcaacgtcttc
gcctggcatgagaatcagaccccgtcgtgtttggccgtctcacccgaaggcctggttcga
ttctggcccaacatcgctcatccaagctcgtccactgaagtgagtgctgacctccaaggc
caagagtgccatagcttaaccgatctccagcctttgggttcggttctggccaccacgacc
tcgaccattgtcctcgtgcacgttctcaatgtgggtggacagcacaagatcgtgtgccgt
caactcaaaccaccccatggtctcttgggagggattggtcgacgtgtgtcctcgttattt
tggggagggatgcccgccacgggtgaagcgaaattggtacgtgttctgacatcaaacgtc
aagtcagccagtagccaagtgaccttcgtgctcaccacgatgggtttgcaaaagtggatt
ttggagagtgatactcaagaacgactcctatacgagtggcccgttcaatcgcaaggtgcc
gagaccttcatgaagcattccatgaaaaatgaagagtgtgacattgggtcattgcgagtc
tgtacattggatatgcaattcacgccaaagggagaattagccattttgatggctgctatg
aacgctcattctcctcagcaagtattctatggaataggtatggtggattgctcaacggaa
gaacaaccgactgaattcaaaaatatcattgccttcaaacccagtgatggatccaaggat
cagaatattacgtccttgggctataagctcatgttccccaacaaaaagtatgcctacatt
ttcaataacgagggtatcatctgtgtcccagcccaaggggacgggaatgaaaatgacttt
ttcgacttttccaccggaggcaacgccattttgggagccaaaagtgtggacggaaagccc
tactttttcgctgccaatcaaggattggtccatctcgccgtgaatcaaaatatgagcgtg
cttgaaccatcgatgacctcgttcaatgagagtgtttctgggtttgaccctatgaccccc
aagaagctgtctgaaagcataaacatgtcggccatctcccaaactggtctggataacctc
tccatttccgaatccaaaagtgaccagctaaaggctgcatttttgctcttctgcaaacga
aacctgactaaatcagcgagcatcatcgagagtttgttcccttcggacaacatgcgaagc
gaaattgactcttcggtggacaaactggttctctccatttccaaggatctcattgacgac
ttcccagcatccgatccccgatggatggagagcgttccggcctccgaggccactttggga
cagggcaccatgggagcaacgatgtccttgttgatccttcatcagcttgaagacaagcaa
actgcactcgagttctttgttagtttcctcaaggaagttggtctttggaacaaattgtgt
ggtgtaactatccgggaaactccaatcccgacatctttggttctctgcgaacaagttgaa
aaaaccgcggccgccatagcccttcgtaccattcactccgagcatcaatccttagtagac
aaggccattgagcgagtggttcggcatcgcaaggtcgtgttggaaagaggacttacttct
caagatcacttttatcgagagatttcgcgggttcacgagatttttgacggtcttcaagcc
cttcaagatgaattgcttctttcccagacccctagagagatcgttaatgctctcatcgcc
atcaatacaatttttcaacgagtcctgaaggatgctcttcaagtgagagagaaaaaggcc
cttgaatttagcccgcccaagtctcttatcgaggaaatggagtacattccatggagctcg
gccccgggtcctaagggtcttcgtactgctcttattaatcaagtgaagatctcaatggag
aaaggtctctctttggccgagaataaggccacccgagtggagattgtaaaacaagttgtc
catttgattgacttcatcttggatggattcctttgccaattgaacaaaaccaaagaggct
cgtcgtccagtcgtattgaaacagtacgagaaaaaccgaagcgaactcatttctacttta
gtgagcaaaggatatctggaagaggccaccagtttggcggagaagtacttggagtttgtg
gctttgatcaaaatctgcgaaatcacaaaaaatcgcgctcgtttagatggttacatggag
gaattcgcagagcacgatttctcatcgttccatttcgattggctcgttcgcgaagggaaa
caagggatgctcctcagccagacgtcgagctctcgtcatggagaattgggcaagttccta
aaaggccattccaatatttcttggctgcatgatattcaaatcggagattttggcaaggct
tcgtataccttgggtaatcttgggaaacacgaaactgatctgatcgccagaaaaaagact
attttaagtctggccaaactcgccgccttggcctcggatgagagcgacgaaaacattttg
aagtcagtcaatgacgttgaagatcaactcatggtactggatgctcaagagcaattgccc
aaaagtgttatggatgcgttcaaatttgactctgaatccatgcacgttctcgctgcccgg
gagattattgagttgtacattggggatgagaacatacaaggagatcacatagacttcaaa
aaggctttggacttattggattttgtcaatgtggtcgatgaagaagagatgaccgcactc
agacttcacatctggagtaaagccattctcaaagattcatgggtagactttgacgtcgat
aatcctttggaggcggtaaaggagacggtttgcttcaaattgatcgagttctgttacatc
caaggggcggatttatccactttggtgccatcggttgaagaaatactgagtgctgacgag
ttatccggtttagccaaaaacagaaatttccaatttttactccaaactggatacgaacat
ataactcgagtgtgtcaagaggagtcggataaaatggactcttaa
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