Tigriopus californicus (tidepool copepod): 131889785
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Entry
131889785 CDS
T09700
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 24-like isoform X1
KO
K15167
mediator of RNA polymerase II transcription subunit 24
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcf03021
]
131889785
Transcription machinery [BR:
tcf03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
131889785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med24_N
Motif
Other DBs
NCBI-GeneID:
131889785
NCBI-ProteinID:
XP_059094945
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All DBs
Position
11:9778851..9782539
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AA seq
1021 aa
AA seq
DB search
MMTLDPIQTTSGAIQSLLIRAWRERWSDVQWGIQIKTLIHRGCTGDTYQLSQILLNQALM
GPSPNGLVLGFLRHSLASQVVSHASVLSAVAAFQDWHKPHGSGALLDLITSAQGHVTCKG
RPEDCVQLAVALLQVHGWLLQLLSATFQRLERLRDSKIDSRNYRRAVDALTFFTQSDFGL
TLLYIGRGEDRETHSQVVAAGKKVADLARQAHLFDQEPAALKVELNQILTALKAPEPMRI
PSPPVPMSHVGSLQPMLAYEALLHPTSDLVSLSRQIYAYGHGQSLSFAELAFQVLQSCLV
SFSPHYQFDVIRWDAFLFWRLPTLIEQLALLMKVETAQLKTPTDLYQAFEKLLSCHTLLN
AVDAGGECNIIKILLGVLGRISPRLMTETEVDDVLNGRAAKMIPPPEPKTMTGVNPDFNE
YAGMPSRKIELTLKAESTMDSILMTLDTDYTKPDSMEDLLGVLAHIIQGDSADKLLGASV
AIGKFPEFIRSMVKFNQQAQESQGESVKNSLLRAALFDMTFLMLIYSAQRSGSEMLQIVL
AEAKGTFVEGWLRDMFIEDGNVKPIHQDSPGENTMVDNLLQQLHSGDLRTQVVKWQNVCA
NIHLAMKEMVFASSSKMLDANSFKKMTQTLCSKLCALPVCVLTWLISYKSCVADSKLRMG
HIIHEFLILLDQEEVFVSDMPHKTERLALMRTILSRVLKDVGIVPQSASFKSQPPSLLAN
NSESLNIALKKEWIKITTLGRLEISNAYNLLELYKTGGAIWFTSVLIDELFSIVYQDQLD
KWSNLLVSIFHIDLEQCTLALLLRVIPAYLTCRNKKYRLTDPHGTTVAKVLVSCLYSVLI
PDHLNFKNPAKPGKKRSIAQTDWENDLPTAKMHKILGDIGEEESSATPSSSFSALPNTHT
PKSELNKDDFNGSTVSQATKFFLTVLHAISQESTLTPAVHFTVKFLEQAALQGKSKSRLI
FHHLNTQTILTLIKIVPELFTIGFAAQLFDNSSSTGRKNMARTICLLRNIHRKRDLTKGE
S
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgatgactttggacccgatccaaaccacgagtggcgccattcaaagtttgctgattcga
gcgtggcgtgaacgatggtccgacgtccaatggggcattcaaatcaagaccctcattcat
cgaggttgcacgggcgatacgtaccaattgtcgcagatcttgctcaatcaagctctgatg
ggcccttcgcccaacgggttggtcttgggatttctgcgccattcgttggccagtcaggtc
gtgtcgcacgcctcggttttgtcggccgtggccgctttccaggattggcacaaaccccac
ggatctggcgcattgctcgatctgatcacgtcggcccaaggtcacgtgacgtgcaaaggc
cgacctgaggattgcgtccagttggccgtggccttgctccaggtgcatggatggctgctt
caattgctcagcgccacttttcaacgcttggaaaggcttcgcgactccaagattgacagc
cggaactatcgacgagccgtggacgccttgaccttcttcacccagagtgactttggcttg
acgttgttgtacatcggtcggggcgaggatcgcgaaacccactcccaagtcgtggcggct
ggcaagaaagtggccgacctggcgcgtcaagcccacctgttcgatcaagagccggcggcg
ttgaaagtggaactgaaccaaatcttgaccgcgctcaaagcgcccgaacccatgcggatc
ccatcgccacccgtacccatgtcccacgtgggttcactgcagcctatgttggcctatgag
gccttactgcaccccacttcggatctggtctcgctcagccgtcagatctacgcctatggc
catggtcaaagcttaagctttgccgaactagcgtttcaggtgcttcagagttgcttggtc
agcttttcgccgcattatcagttcgacgtcatccgttgggacgcctttctgttctggcgc
ttgcccaccttaattgaacaattggcgttactcatgaaggtcgagaccgctcagctcaaa
acgcccactgacctctaccaggcctttgagaagctgttgagctgccacaccctcttgaac
gcggtggatgccggaggtgagtgcaacatcatcaagatccttctgggcgttctgggtcgc
atttcgccccgtctcatgaccgaaaccgaggttgatgacgttttgaacggccgagcggcc
aagatgattcctccacctgaaccgaagaccatgaccggagtcaatccggatttcaatgag
tatgcgggtatgccgagccgtaagattgagctcaccttgaaagccgaatccaccatggat
tccatcctgatgactttggacacggattataccaaacctgactctatggaagacctgctt
ggtgtgttggctcatatcattcaaggggatagcgctgacaagctcttgggcgcgtctgtg
gccataggcaagttcccagaattcattcgcagtatggtcaaattcaatcagcaagctcaa
gaaagccaaggcgaatctgtgaagaattctcttttgcgagcggctctttttgatatgacg
tttctaatgttgatctatagcgcccaacggtcgggaagcgagatgttacagattgtactg
gcagaggccaagggcacatttgtcgaagggtggttaagggacatgttcattgaagatgga
aacgtcaagccaatacaccaagactcgcctggtgagaataccatggttgataatcttctt
caacaattgcactctggcgatctaagaactcaggtggtaaaatggcaaaatgtgtgcgca
aacatacatctagctatgaaggagatggtattcgcttcatcgagtaaaatgctggacgcc
aattcctttaagaaaatgacccaaaccttgtgctcaaagttgtgcgctctgcccgtttgt
gtgctcacttggcttatcagttacaagtcttgtgtggccgatagtaaactacgaatgggt
cacatcattcacgagttcctgattcttttggaccaagaagaggtttttgtgtccgatatg
ccacacaaaacggagcgtctagccttgatgagaacaatcttgagtcgggttctgaaagac
gtgggcatcgtgccacaatcagcctcgtttaaaagtcagccaccatcacttttggccaat
aactctgagtctttaaacatcgctctaaagaaggaatggatcaaaattacgactttggga
cgattggagatttcgaatgcctacaatctattggaattgtacaaaactgggggcgccatt
tggttcactagcgtgttgattgacgagctcttctcgatcgtgtaccaagatcaattggac
aaatggtccaatctgctcgtatcgattttccacatcgatttggagcaatgcaccctagca
ctcctcctacgagtgatcccagcttatctgacgtgtcgaaacaagaaataccgtctgacc
gatcctcatgggaccacagtggccaaagtgctcgtgtcctgcctctattcggtgctcatc
ccggaccacctcaatttcaaaaatccagccaagcccggcaagaaaagatccattgctcaa
actgattgggaaaacgatttaccgaccgcgaaaatgcataagattctaggggatattggt
gaagaggaatcctctgccactccgtcgtcctctttcagtgctctaccaaatactcacacg
cccaaatctgaattgaacaaagacgattttaatggctcgaccgtttcgcaagccaccaag
ttctttctcaccgttcttcatgccattagccaagagagcacattgactccagccgttcat
tttacggtcaagttcctggaacaagcggctctccaagggaaatcgaagtctcgcctcatt
ttccaccatttgaacacgcaaaccattttgactctcattaagatcgtacctgaactcttc
accattgggttcgcagcccaactatttgacaactccagttcaactgggcgaaaaaatatg
gctagaacaatttgtttattgcgcaatattcatcgtaaacgtgatttgaccaaaggggaa
tcataa
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