Tigriopus californicus (tidepool copepod): 131889797
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Entry
131889797 CDS
T09700
Name
(RefSeq) lethal(2) giant larvae protein homolog 1-like isoform X1
KO
K06094
lethal(2) giant larvae protein
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131889797
Membrane trafficking [BR:
tcf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
131889797
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_EML_2
Beta-prop_HPS5
Lgl_C
Beta-prop_RIG_2nd
WDR55
WD40_Prp19
WD40
Beta-prop_VPS8
EIF3I
Beta-prop_RIG_1st
DUF5998
Motif
Other DBs
NCBI-GeneID:
131889797
NCBI-ProteinID:
XP_059094974
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Position
1:12036897..12047544
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AA seq
1114 aa
AA seq
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MPQPAHQSQSQSMSNLHNHRMLKFIWSKGHQPNAERLRIQKDLFGFHKEVQHGFPNKPAA
MAWDGELKLLAIATKHGALRVVGQPGVEFIGEHEQDQPVSKMIFIPGQGRLVTLTEDNFL
HLWEINGTEITEKSSTHLDGRLKRVSVMCHDSIHNMVLLGTEGGNIYQLKLEIFTISENI
IYQDIVMKGAPEDFKVNPGAVEGLLIQPNESERILIGYARGLIVLWDRKSSVASQTYVTS
QQLESLAWRNDGSQFISSHNDGSFVIWSTQGNGEPLEPPNTPYGPYPCKSISKILWAHQN
GSTWVVFSGGMPRASYGDKFSVSVMMGEDKHQVFDLSSKVVEFELFYDEESTNRPAGIFV
LTEEELVTIDLATDSWPVFHAPYLNSIHASAITALIQVSNVSECVFTKLKEMGEAERKDK
VSDREWPVNGGVVPEKSNKDASCHDLLVTGHEDGSVKLWSCGDSALALLLSVKTNKFFVG
DELDEPFEEDEDEEEWPPFRRIGLYDPYSDDPRLAIKKLAFCRQSGRLLVGGTAGQVLVC
ELQDQAVEAKMLPIKVDLVTEKEGFAWKGHAALTIRTNEIKMEPGYQPSCVIQVSPPASI
NSLVSSKEWELAAIGTAHGLVLLDCIHQVAILTKCTLNAQDIANADDNPMSRRKSLKKSL
RESFRRLRKGRSQRNIDKKRPGVPTDPIKKELRSESPESRPVERQVEARSGSEDGLGSMV
RCLHFANTFIANPQTLSATLWAGTNSGQILVFLITLPGSEKRSSVKSSAILGKEIQLKHK
APVIAIEVLDAGGVPVHESNPDGAPAPHKVLIASEEQFKTFLLPTLKPSGKYKLTAHEGA
RIRKIGFTTFKSRADSNYMENCLMCLTNQGDISIHSLPEMRRQIQTNCVKKEDVIAISSF
VFAPTGEAFYSCSSSELQRVSVAAGRIVRPSGYLQLAEDARPVAKEEKSAPASTTVDKPE
EAPTIPAAPSPGDPHNDTTMSEVSGDITLDSVKDHTMSSISEHTSTVVSSSSSLTISRTV
QVSESKTITTASSSGTAISTESTTKPTSPVNGENPTPEVHELADDLTHMTHISLDDPVEP
DPEDIDPLAPLASMESTGSEFPSMISTTSEVQSV
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagccagcccatcaaagtcagagtcagagcatgagtaacctacacaatcaccga
atgctcaagttcatttggagcaaaggccatcaacccaatgccgagcgactccgcattcaa
aaggatctcttcggcttccacaaggaggttcagcatggatttccaaacaagcccgcggcc
atggcatgggatggggaactcaaattactggccattgccaccaaacacggagctctcaga
gtcgtgggacaaccgggggttgaattcataggcgagcatgagcaagatcaacctgtgtcc
aagatgatcttcatcccgggtcagggtcgattggtgactctcaccgaggacaacttcttg
catttatgggaaatcaatgggaccgaaatcaccgagaagagttccacgcatttagatggc
cgattgaaacgagtgtccgtcatgtgtcatgactcgattcacaatatggtactcttgggc
acagaagggggcaatatctatcagctgaaactggagatattcaccatttctgagaacatc
atctatcaagatattgtcatgaaaggagcacccgaggactttaaggttaaccctggagcc
gtggagggtctgctaatccaacccaacgagtcggaacgaattttgatcggttatgccaga
ggtttaatcgtgctttgggaccgaaagtccagtgtcgcctcacagacttacgtaacatca
caacagttggaatccttggcttggcgaaatgacggaagtcaattcatctcgtctcacaat
gacggctcttttgtcatctggtctactcaaggaaatggagagcctcttgagccgccaaac
acaccgtacggcccttatccatgcaaaagtatctccaaaattctgtgggcacatcagaat
gggtcgacttgggtcgtgttttcgggtggcatgcctcgggctagttatggagacaagttc
tcggtgtcggtcatgatgggcgaggacaaacatcaagtgttcgacctcagttccaaagtg
gtcgagttcgagttattctacgacgaggaatccaccaatcgccctgctggaatatttgta
ctgacagaggaggaactcgtcaccattgatctagccaccgactcgtggccagtgttccat
gctccgtacttgaactctattcacgcaagtgcgatcacggctttgatccaagtttcaaat
gtttccgagtgcgttttcacgaaactcaaggagatgggcgaagccgagaggaaagacaag
gtctctgacagggagtggcctgtcaatgggggagtggtgccggagaagagcaacaaagac
gcgagttgtcacgatcttctcgtaactggccacgaagacggaagtgtcaagttatggtcg
tgcggtgattccgctttagccctgctcctgtccgtgaaaaccaataaattttttgtcggc
gatgaattggacgagccctttgaagaggatgaagatgaagaggagtggcctcctttccgc
cgcattggactttacgacccttacagtgacgatcctcgtttggctattaaaaaactggcc
ttctgtcggcaaagtgggcggctcttggtaggtggaactgctggtcaagtcctcgtttgt
gagctacaggatcaagcagtcgaggccaaaatgctcccaattaaagtggatctggtgacc
gaaaaagaaggctttgcatggaaaggacacgcagccttgaccattcgaaccaacgaaata
aagatggaaccgggttatcagccttcatgtgtgatccaagtctcacccccagccagtatt
aattcattggtgtcctccaaggagtgggaattggccgctattggaaccgcccatggactg
gttcttttggattgcatccaccaagttgcaatccttactaaatgcacattgaatgctcaa
gacattgctaatgcagatgacaaccccatgtcgcgtcgaaagtcattgaagaaatccttg
agagaatcattccgcagattgaggaagggacggtcacagaggaatattgacaagaaacga
cccggagttcccacagatcccatcaagaaagagcttcgttccgaatcacccgagtcacgc
cctgtagagagacaagtagaggctagatctggatccgaagacgggttaggctccatggtc
cggtgtctacatttcgccaacaccttcattgccaacccccaaactttatcggccaccttg
tgggctggaacgaacagtggtcagattttggtgttcctcatcactcttcccggaagtgag
aagcgttcgtcggtcaaatcgtcagctattttgggcaaagagatccagctcaagcacaag
gcaccggtcatcgccattgaagtcctggatgcaggaggcgtgcccgttcacgaatccaac
cccgatggagcgccagctccccataaagtattaatcgcatcagaggagcaattcaagacc
ttccttttgcccaccctaaaaccctccggcaaatataagctcaccgcccacgaaggcgct
cgaatccgaaaaatcggtttcactaccttcaaatctcgtgccgacagcaattacatggag
aactgcttgatgtgtttgacgaatcaaggcgacatttccatccattccttacccgagatg
cgccggcaaatccagaccaattgcgtcaaaaaagaggacgtgatcgcgatctcctcgttc
gtgttcgcacccactggcgaggcgttctattcgtgctcctcgtctgagcttcaacgtgtt
tccgtcgctgccggtcggatcgtccgacccagcggatatctgcaactggccgaggatgcc
agaccggtggccaaggaggagaaatcggccccggcaagcactaccgtggacaaaccggaa
gaagctccaactattccagccgcgccttctccgggtgatcctcacaatgacacgaccatg
tcggaagtgagtggggacatcaccttggattctgtcaaggatcacacgatgagctcgata
tccgagcacactagcacggtagtgagctcaagctcctcgctaacaatctcgcgcacagtg
caagtgagtgaatccaaaaccatcaccaccgcatcttcatccggtacggctatcagcaca
gagtctaccaccaaacccaccagcccggtcaatggcgaaaatcccactccagaagtgcat
gaactagccgatgacctgactcacatgactcacatttccttggatgatcctgtggagcct
gatccggaggatattgatcccttggctcccttggcgagtatggaatcgacgggaagtgaa
tttccgagcatgatctccaccaccagtgaagttcaaagcgtttga
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