Tigriopus californicus (tidepool copepod): 131889869
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Entry
131889869 CDS
T09700
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131889869
04121 Ubiquitin system [BR:
tcf04121
]
131889869
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
131889869
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
131889869
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
DUF659
zf-BED
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
131889869
NCBI-ProteinID:
XP_059095066
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All DBs
Position
11:8027334..8029824
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AA seq
575 aa
AA seq
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MFDKMERDIARCRMCQIDLKMSNHGTTSLWRHAKSKHSEELTMLSYECASELTQHKERPY
LAKSEKKLHLDRLLAKMIAKDIQPISMVEDVGFLNFCQALDPKYSLPSRRTLSDTILPSM
FEEIQGRLVKQLEQTSWVCLTTDLWTSLNAVGFLAVTVHFWNQHDEDLCSFTLDCIRIHG
RHTSQILGEELQKILVRNNVLSKVVVCVTDNGANMVKAVKNTKLCHIPCYAHTLNLVANG
SPRNVPAVHKVIETASKIVEQTKKSSIVHEKFETIQRNQGIPVVKKLIQDVATRWNSTYE
MMDRIVELRGPICELMSEQGMCDKVGCVDSNWWQAVSQCVEVLQPLYEATLELSGEQRPT
GSKIIPITKMLTHHYQKNVDKSEAGSVAHDLASEVLANITRRFGIFEDFPELAISTILDP
RFKSHGFQYDCKLTHASDLLLQELGKLIEVEAPFHQVEESRPKQTRTSLWEPFDQCIVQK
RESGLFKSARCELNAYFQQPCESRHSNQITWWNKDGRAQFPLLYKLAMKYSIIPATSVPS
ERVFSVAGQVLSKRRNRLGDECARLLICLHNNINA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataaaatggaaagagatatcgctcgttgcagaatgtgccaaattgatctcaag
atgtcgaatcatggcacaacttcgctttggaggcatgctaagagtaaacattctgaggaa
ttaactatgttaagttatgaatgtgcgtcagaattgacccaacacaaggaacgcccatac
ttggccaagtcggaaaagaaacttcatttagatagacttctggccaaaatgatagcaaaa
gacattcagcctatctcaatggttgaggacgttggtttcctcaacttctgtcaagcattg
gacccaaaatacagtcttccctcgcgacgtaccttgtcagatactatactaccatccatg
tttgaagagattcaaggaagattagtgaagcaattggaacaaactagttgggtctgtttg
actacggatttgtggacttcgctcaatgctgttggattcctagctgtaacagtgcacttt
tggaaccaacacgacgaggatctttgttcctttacattggactgtattagaattcacggc
cgccatacatcccaaattctcggcgaagagttgcaaaaaatacttgttagaaacaatgta
ttgtccaaggttgtggtttgtgtcactgacaatggtgcaaacatggtaaaagctgtcaaa
aacaccaagctttgccatataccttgctatgcacacactttgaatttggtggccaatgga
tctccaaggaatgtgcctgccgtccataaagtgatcgaaacagcatcaaaaattgtagag
caaacaaagaagagctccatagtccatgaaaagtttgaaactattcaacgaaatcagggt
ataccagtggtgaaaaagcttatacaagatgtggccacgcgatggaactcaacatatgag
atgatggatcgcattgtagaattaagaggcccaatttgcgagttgatgagtgaacaaggg
atgtgtgacaaggttggttgtgttgattccaattggtggcaagccgtttctcaatgtgta
gaagttcttcaaccattatatgaggcaacgcttgaactatcaggagaacaacgacctaca
ggctccaaaataattccaatcaccaaaatgcttacccatcattaccaaaaaaatgtggat
aaatctgaagcaggatctgtggcacatgatttggcttcagaagttctagcaaacataacc
cgtagatttggaatttttgaagacttccccgaactggccatatcaacaattttggatccc
cgctttaagagccatgggtttcagtatgattgcaaactaacgcatgcgtcagatttactt
cttcaggaactgggaaaattgatcgaagtagaggccccttttcatcaagttgaagaaagc
cgtccgaaacaaacccgaacatctctttgggaaccatttgatcagtgcattgtacaaaaa
agagaatctggactcttcaaatcagcgaggtgtgagctcaatgcatattttcaacaacca
tgcgaatcacgtcactccaaccaaatcacttggtggaataaagatggaagggctcaattt
cccttattgtataagcttgcaatgaagtattcaattattccagcaacatctgtgccctct
gagagagttttttccgtagctgggcaagttttatcaaaaaggcgaaatcgccttggagat
gaatgcgccagattattgatctgcttgcacaacaacataaacgcctga
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