Tigriopus californicus (tidepool copepod): 131889942
Help
Entry
131889942 CDS
T09700
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04080
Neuroactive ligand-receptor interaction
tcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
131889942
04082 Neuroactive ligand signaling
131889942
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131889942
Ion channels [BR:
tcf04040
]
Ligand-gated channels
Glutamate (ionotropic)
131889942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan-Glu_bd
Lig_chan
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
131889942
NCBI-ProteinID:
XP_059095158
LinkDB
All DBs
Position
1:8061691..8079841
Genome browser
AA seq
933 aa
AA seq
DB search
MGMSVTRTVLIFSAVSSLAYLALVESRQVHLGLIVPYSIYKDRDYTKMVSKSIFELRKAG
SKLFAFRPNDQIHRIMMKVNPGPTEILGTLCDNFAQNNVSAIVFMTNNELFGRSTASSQY
FLQLTAFLGIPVITWAADNAGLEIRSHEDLQVHLAPSIDHQAEAMLALLRRYQWKQFSIL
TSNIAGHEDFIQSVRDKILPSRNPLQIENVVKVTMREDLFELKKSDSRIVLLYCTRTEGL
EILQWAGELGLTGKHHVWIVTQSVIADPNDLAPGFPPGMLGVSFDTSLEYLIEQIPIALK
VFSRAMDALLANSKGWQDSPGLSCNLPDLPDQDGSGTYKHYGRLLHKYMLNVTLPENEGR
GPLRFHHNGELTDVTLRIMNARMNGLWEEVGIWKSNRNGDGLDIQDIVWPENSLVPPEGV
PERFHLTIGFLPEPPFIHVTPPDPITNKCHVDRGVVCTIHNATRNEPIVQCCSGFCIDLL
EKLSDDLQFEYNLVQGTDNRWGVLENGTWNGLMASLVEKKVDMVLTSLKVNSDREAAVDF
TVPFMETGTSIVVAKRTGIISPTAFLEPFDAASWLLVGMVAVQLSAIAIYSFECVSPKET
PPPSKSFNMSDLTLYKTYWLVWALLCKTPVHITSPCTFSARFMGSVWALFAVVFLAIYTA
NLAAFMISREEWDTYTGIQDPKLSNPMSVKPPLRFGTVPWTYTEHALAVHFPSMHSHMKQ
FNTFDAASGIDRVKKGQLDAFIYDGTVLNHMVAEDEECKLLTVGSWFAMTSYAVALPKNS
KHYMSFNREIIEYKENGDLERLRRFWFTRSCNPMDDENKSTEPLAPEQFLSSFFLLFSGI
LLSFLILILELVGLSDYLPWNFHFWIDWQTRKDRPKSDKEKAHDAPKSKKLQHLLCQSRK
CNLGKLHLQIELGNKRSHIARLAKRLEILEGMK
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgggtatgagtgtcacgcgcaccgtgttgatcttctcggcagtctcgagcttggcatat
ttggccttggtcgagtcccgtcaagttcatttgggactcattgttccctattcaatatac
aaggatcgagattacaccaagatggtatcgaaatccatttttgagcttcgtaaagctggc
tctaaactatttgcctttcgtcccaatgatcaaattcatcgtattatgatgaaggtcaat
cctggacccactgagatattgggcactctttgcgataattttgcgcagaacaacgtgtca
gcgatcgtgttcatgaccaataatgaactgtttggaagatccacggcctcgtctcaatat
ttcttgcaactgacggcgtttctaggcatccccgtcatcacatgggctgcagacaatgct
ggtctagaaatcaggtctcatgaagacctccaggttcatcttgctccaagtattgatcat
caagccgaagctatgctggctttactccgtcgctaccaatggaagcagttctcgattctc
accagcaacattgcgggtcatgaggattttattcagtctgttcgagataagatactccct
tcaagaaacccacttcagattgaaaatgtggttaaggtgacgatgcgcgaagaccttttt
gaactgaagaagtcggactcacggattgtgcttctctactgcacccgaactgagggcttg
gaaattctccaatgggcgggggaattgggtctgaccggcaaacatcacgtatggatcgtc
actcagagcgtcattgccgatcccaatgacctggctcctggatttccgcctggaatgttg
ggagtgagcttcgacacttcgttggagtatctgattgagcaaatacccatagccttgaag
gtcttttcccgagctatggatgccctcttagcaaactcaaagggatggcaagattctccg
ggactttcttgtaacttaccggatctacccgaccaagatggctccggcacgtacaagcat
tatggacgacttttgcataaatacatgctcaatgtgactctgcccgagaacgaaggcaga
ggcccccttcgatttcatcacaacggagagttgactgacgtgactttgagaatcatgaac
gctcgaatgaacggcctttgggaggaggttggaatatggaagagcaatcgaaacggcgat
ggcctggacatccaagacattgtttggccggaaaacagcctcgtcccacctgagggcgtc
ccagagcgtttccatttaactattggcttcctgccagagcccccattcatccatgtgacc
ccacctgacccgatcacaaataaatgccacgtggaccgaggagtcgtctgcaccatccat
aatgccaccagaaatgagcctatcgtgcaatgttgctcagggttttgtattgaccttttg
gagaaattgtcagatgatctgcaattcgaatataatctcgttcaaggcactgacaatcga
tggggagttcttgagaatggcacatggaacgggttgatggcttctttagtggaaaagaag
gtcgatatggtgcttacctcattgaaagtgaactcagatcgagaagccgccgtggatttc
actgtgccattcatggaaactggaaccagcatcgtcgtggccaaacgaacggggattatt
tccccgacagcttttttagagccttttgatgccgcctcatggctgttggttggaatggtg
gctgtgcagctgtcagctatcgccatttacagttttgaatgcgttagccccaaggagaca
ccaccgccatccaagagtttcaacatgtctgatctaacactgtataaaacatattggctg
gtttgggccttgttatgcaaaaccccggttcacatcacctcgccctgcacgttctcggct
cgttttatgggctcagtttgggccttgttcgccgtggtatttttggctatctatacagcc
aacctggccgctttcatgatctcgagagaggagtgggacacctatacaggcatccaagac
cccaagctctcgaacccgatgagtgtgaagcctccattgcgatttgggactgtcccttgg
acctacaccgagcatgcactggctgtgcattttccatccatgcactctcacatgaagcag
ttcaatacatttgatgcagccagcgggatagacagagtgaagaaagggcagctggatgct
ttcatttatgatggaacggtgctcaatcacatggtagcggaagatgaggaatgcaagctg
ctcaccgttggctcttggtttgccatgaccagctatgcggtggctctacccaaaaactcc
aagcattacatgagtttcaatcgggaaatcatcgaatacaaggaaaatggggacttggaa
cgactgcgtcgcttctggtttactcgttcctgcaatccgatggatgacgagaacaaatct
acagagcctttggcgcctgagcaattcctctcgtcatttttcctcctcttcagcggaatc
ctactgtcgtttctgatcctgatactggagctggtgggcctctcagactatttgccttgg
aactttcacttctggattgattggcaaacgcgcaaggaccgacccaaatctgataaagag
aaagcccatgatgcgcctaaatccaagaaactgcaacatctcttgtgtcaaagcagaaaa
tgtaatctggggaagctccatcttcaaatagaattggggaacaaaaggagtcacattgcg
cgactggctaagcgattggaaattctcgaaggaatgaaataa
DBGET
integrated database retrieval system
