Tigriopus californicus (tidepool copepod): 131890023
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Entry
131890023 CDS
T09700
Name
(RefSeq) protein turtle-like isoform X1
KO
K22656
immunoglobulin superfamily member 9B
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tcf04515
]
131890023
Cell adhesion molecules [BR:
tcf04515
]
Immunoglobulin superfamily
IGSF9
131890023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
fn3
Ig_DSCAM-DSCAML_C
Tissue_fac
C2-set_3
C1-set
Sema4F_C
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
131890023
NCBI-ProteinID:
XP_059095269
LinkDB
All DBs
Position
11:complement(5720718..5794227)
Genome browser
AA seq
1829 aa
AA seq
DB search
MSPSSSGRSQRRFKAMGVSDMPTSVPLVLFVILALCLHTVPGFPSAPSEADHITANAGDS
VVFNCDVHFPEGKAVPYVVQYRKKGKDLPIYIWYANYPSHVDKEYAGRVSKIDSMDSIYG
LASLNITNVNEKDRGWYNCEVLFLNRGPDTTNNGTWYHMDVHAPPYFMDTPDEIMYVNTH
DSTILSCEAGGTPAPEILWFKGDKAIQISHRIGVFNDGTELRISNILERDLGDYTCIARN
GVYNGSIHFTTKLVMAGAAVITDPPKNQTAAEGHGVSFECKGEANPGNISVAWFKDGIPI
QSVRSPNFEASVTSDGTLVIRKAKSESQGRYTCKVSNGIGRPIEATAYLAIEYPARVTYH
PDVQYIPRGLQGIIRCYIDSNPPIQFVTWTKDKRIYDPFGLPGVMAMENGSILIDRVTQE
HAGDYVCTPYNIHGTGRSSKVMQVIIKDPPTMLRRPEQEYHRSVGDKITMPCRAIGTPKP
KISWRRVDGHHLPRKRHKLYNGELTLDALHKSDHGVYECVVENEVATIVARTELKIERTT
PHAPTNLTVANSQTFAVTIEWMPGYSGCAACQQTYKIRYREKDSKFPNWIELAVNPPDAR
KIRIHNLKSNTKYEFQVIGTNEYGDGMYSQIIEAQTKADGGLEWSVYPPTASPSEQSTST
ACRGRLRKNGTLTSKPRGARRKLLSSDCIDLNLEIHGCSCRNSGSGPTDIPPGEAPPPAT
NLSLTQEAGGWVLRWQGPPKGSNVSYYTIQIKKNSQGGKWKPLTDQKIDVEEASYMFKNM
GTAKSYLFRVFSHSVTSYSISEEHAYDLPENVKRRAVTAGLIGGILFFIVAIVLSVCTVK
ICNKRRRRKQERAIQEIQNSNVPTYNMVACRLSQTRNGGQMSQQVPLKRNGKSGIPAMRM
SHSNSDPHPMYRPQTTKKSLSLRKGLMSMFDQTADCIMSLEERLVSINNNQTVHGQTHSN
RAYWSNEPDYSDGKERARPFKLGSQRRGVKYSFHVEYPSSSGNRGLISRSKDGKFHLEDD
DVNDEGGFEVALPPNRFRTRSVAIIAGYTSERLYSNMPPGAFVVESGMYKVGADREWERP
EPIYWRQVVYGKNGSDGSGTLPKPPHPRSKQVGRLAEEDLKRLRAMEPSSTSINTINGNS
SQQNLIRTSNLELVRADQGTAAGHVKLRASSPLDQQVPLTAWMSPIHNYSDVSSVSHQER
SIPSTLLTNPTSSLSLTSPNLTAENTASSRSLKNTQRSTDLHTIPEHLPSEEEAPPAYSA
TPEQNLSVVQADIHHPGLPNQPRAYALPSQHPYWAAGHTYLNADVMFPNYALNYPAPVHG
SISPSRQYPDLPTPTIPYWHSLYVQPAVDPRLWDLQNPLATSSPPIREAAGEAPPEYENM
KYMSGRRTAMQPPTRPIKRKPPDLAQSRSKQNRHSAVIDGQLANRQDLNKPTVSVSSSSK
NNPGTPGQSRSRAEDQLSLVSEVLDAEVTALTNSSSPGSYSNGGTFDGHEQHDLEEVQEA
IKKAKERMGSPSTTTTTLGGGSLSQPEESSSSSGIPSKNNSQHQTSSSSSHSTSGSNANQ
ASLMSPDLSSKSTLEPILEPIQPFYENWPPLKVGTGYLPAIQPKVHTYYGYQYVTGLPSG
TLSIAPPGAELYLPPLTPHQTLGLLAKPQAASRAINRRVEVTPGADLNTSLDTPPSRFES
RPGSSHSAPLLDVSIDRHYEFDARSPTEDLHYQNIREALPRQWNRPYLGYNPRARELELG
TAASLAQSERVFSDSEIYSPVFPRGRPEPRENIHERVQAMKKEFQEYRQQQMELKQQQQH
QETLGTGADGDSSTEANDGLGITKLESLI
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctagctcatccgggcgatcacaacgacgattcaaggctatgggcgtgtcggat
atgccaacttcggtccctcttgtcttatttgtgattcttgccctatgtcttcacactgta
ccgggattcccatccgctccttcggaagcggaccacatcactgccaatgctggagactct
gttgtcttcaattgtgacgtccacttccccgaaggaaaggccgtgccctatgtggttcag
tacaggaaaaagggcaaggatcttcccatctatatttggtatgccaactatccatcccac
gtggacaaggagtatgccggacgagtcagcaaaatcgattccatggactccatctacggc
ctggcaagcctcaacatcactaatgtcaatgagaaagaccgtggatggtataattgcgag
gttctcttcctcaaccgaggaccggataccaccaataatggaacttggtaccacatggat
gtccatgcgccaccctatttcatggacactccggacgagatcatgtacgtcaacacccat
gactcgaccattctcagttgcgaggcggggggcactccagcgcctgagatcctttggttc
aaaggagacaaggccattcagatctcccatcggatcggcgtcttcaatgacgggacggaa
ctgaggatttctaacattttggagcgtgatctcggggattacacgtgtatagcgcggaat
ggtgtctacaatggaagcattcactttaccaccaaacttgtgatggcaggcgccgctgta
ataaccgatccgcccaagaatcaaaccgcagccgagggtcatggcgtcagctttgagtgc
aagggtgaggccaatccagggaacatatccgtggcctggtttaaggatggaataccgatt
caatcggtaaggagtcccaatttcgaagcgtctgttacatcagatggaacgttggtgatc
cgcaaggcgaaatccgaatcccaaggccgctacacgtgcaaagtcagcaacggcatcgga
agacccatcgaagccacagcttacctagcaattgaatatccggccagggtgacgtaccat
cctgatgtccaatatattccgcgaggactgcaggggatcattcggtgttacatcgattcg
aatcctccaattcagtttgtcacatggaccaaagataaaagaatttatgatccgttcggc
ctgcctggagtgatggccatggagaatggttccattctcattgatcgcgtgacccaagaa
cacgcgggagactacgtctgtactccttacaacattcatgggacagggcggtcctcgaaa
gtcatgcaagtgattatcaaggatccaccaactatgctcagacgtccagaacaggagtat
caccgatccgtgggcgacaaaatcaccatgccttgtcgtgctattggaacgcctaaacca
aagatctcgtggagaagggtggatgggcatcatttgcctcggaaacgccataaattgtac
aacggagagctgacccttgacgctctccacaaaagtgatcacggagtgtacgagtgtgtg
gtcgaaaacgaggtggccaccattgtggctcgaactgagctgaaaattgaacgaaccaca
cctcacgctcccaccaatttgactgtggccaattcccagacctttgctgtcaccatcgaa
tggatgcccggatatagcgggtgtgccgcgtgccagcagacttacaaaatcagatatcgg
gaaaaggactcgaagttcccgaactggattgaactggccgtcaatcccccggatgcgagg
aagattcgcatccacaacctgaaatcgaataccaagtacgagttccaagtgattggcacc
aatgaatatggagatgggatgtacagtcaaatcatcgaagctcaaaccaaagctgacggg
ggtttggagtggtccgtgtaccctcctactgcctcaccctcggaacaatccacttccact
gcctgccgtggtcgccttagaaaaaatggtactctcacttcaaagccgcggggtgctcga
aggaaacttctctcatcagactgcattgacctcaatttggaaattcacggttgctcctgc
agaaacagtggttctggccccacggacattccccccggcgaggctccacctccagccacg
aatctatcgctcacccaagaagccggaggatgggtccttcgatggcagggacctccgaag
ggctccaatgtgagttactacaccattcagatcaaaaagaactcccaaggaggcaaatgg
aagcctttgaccgatcaaaagatcgatgtagaagaagcctcctacatgtttaagaatatg
ggcaccgccaagtcctacttgttccgcgtgttcagccattcggtgacctcgtattcgatc
tcggaggaacacgcctacgatctcccggagaatgtgaaacgccgagccgtgacggccggt
ctcattgggggcattcttttcttcatagtggccattgttctctctgtgtgcacggtcaag
atctgcaataagcgaaggcggaggaaacaggagagagccattcaagagatccagaactct
aatgtgccaacttacaatatggttgcatgcagattatcccaaactagaaatggtggccaa
atgagccaacaagtgcctttgaagagaaatggaaagagcggaattccagctatgaggatg
tcgcactctaatagcgatcctcatcccatgtatcgacctcaaacgaccaagaaatctctc
tcgcttcggaaaggtcttatgtcaatgtttgaccaaaccgctgattgcattatgtcttta
gaggagcgcctcgtatcaatcaacaataaccagaccgtccacgggcagactcactccaac
cgtgcgtattggtccaatgagccggattacagtgatggcaaggaacgagctcggccgttc
aaattgggatcacagcgacgtggcgtcaaatactcgttccatgttgaatacccttcgagc
tcggggaaccggggcctgatctcacgttccaaagatggcaaatttcatctcgaggatgac
gatgtcaacgatgagggcgggtttgaagtggcattgccgcctaatcgcttccgcacgagg
agtgtggccatcattgccggttacacctcggaacgactctatagtaatatgcctccgggg
gctttcgttgtagaaagtggaatgtacaaagtaggcgcggatcgagagtgggaacgccca
gagccgatatattggcgacaggttgtctatggcaaaaatggcagtgatggctctggcacc
ttacccaagccaccacatcctcgaagcaaacaagtgggccgattggcggaggaggatttg
aagcgtctcagggccatggaaccctcttctacgtcaatcaataccattaatggcaacagt
tcacaacaaaatctcattcgaaccagtaaccttgaactggtaagggccgatcagggtacg
gccgccgggcatgtcaaattgagagcgtccagcccactggatcagcaagtgccgctcacc
gcatggatgagccccattcacaactacagcgacgtcagctctgtcagtcatcaagagagg
tccatacccagcaccctcttgactaatcccacctccagtctcagtttaactagtccaaac
ctaacagcggagaacacagcctccagcagaagcctcaaaaacactcaacgaagcacagac
cttcacaccattcctgaacatctacctagtgaagaggaggcaccacccgcctattctgcc
acgcctgagcaaaatctgagtgtggttcaagccgacattcaccacccaggcttacccaat
caaccccgggcctacgctcttccttcccagcacccatattgggccgcaggccatacctac
ctcaacgcagacgtaatgtttcccaactatgctttgaactatcccgctcccgtacatggt
agtatatcgccttctcggcaatatcccgacttgcccaccccgaccattccgtactggcat
tctttgtatgtccaacctgcggtggatccacgtttatgggacctgcaaaaccctttggcc
acatcctccccacccattcgtgaagcggccggtgaagctccacccgagtatgaaaacatg
aagtacatgtctggccgcaggactgccatgcaaccaccaaccaggccaatcaagcggaaa
cctcccgacttggctcaatcgcgatccaagcaaaatcgacattcagctgtgatagatgga
caattggccaaccgacaagatctcaacaaaccaactgttagcgtaagttctagttcaaaa
aacaatccgggaaccccgggtcagagtcgctcaagggcagaggatcagctgagcctcgtg
agtgaagttctggacgcagaggtcacggccttgaccaattcatcgtccccgggcagctac
agcaatggtggcacatttgatgggcacgagcagcatgatctcgaagaggtccaagaggcc
attaaaaaagcaaaggaacgaatgggcagtccgagcacaaccacaactaccctgggcggc
ggaagtctctctcagcctgaagaatcctcgtcctcgagtggaatccctagcaaaaacaat
tcgcaacaccaaacttcttcctcctcctctcattcaacatcgggctccaatgccaaccag
gcctctctcatgtcccctgatctcagttccaaaagtactctggaacccattctggagcct
atccaaccattttatgaaaattggcccccactcaaagttggaacagggtatcttccagca
attcagcccaaagttcacacctattatggctaccagtacgtgactggtctgccatcggga
acactgtccattgcgcccccgggtgccgaactttacctccctcctctaacccctcatcaa
accctagggctcctggcaaaaccacaggccgcttctcgggccattaacagaagggtcgag
gtcactcccggagctgacttgaacacatcactcgacacacctccttcaaggttcgagtca
cgcccaggctcctcgcattctgctcctctcttagacgtcagcattgaccgtcattacgag
tttgacgcccggagtccaacggaggacctccattaccaaaacatacgagaagccctgccc
cggcagtggaaccgcccgtacttggggtacaaccctcgggctcgtgagctggaattggga
acggccgcgtcattggcacaaagtgagagagtgttcagcgattcggaaatctactcacct
gtgtttcctcgtggtcgacctgaacctcgggagaacatccatgagcgtgtgcaagccatg
aaaaaagagtttcaagagtatcgacagcagcaaatggagctcaagcaacagcagcaacat
caagaaactctcggcaccggagcagacggcgattcttcgacggaagctaacgatggtctc
ggcatcacaaaacttgagagtctgatctga
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integrated database retrieval system
