Tigriopus californicus (tidepool copepod): 131890141
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Entry
131890141 CDS
T09700
Name
(RefSeq) sodium-dependent proline transporter-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
131890141
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131890141
Transporters [BR:
tcf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
131890141
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
131890141
NCBI-ProteinID:
XP_059095413
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Position
11:complement(838179..845752)
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AA seq
700 aa
AA seq
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MSSYYSHHQGGGGGGSNRGPHYSANSYPSYPNYGYTTDSHHEMSEYNGKGTYSSRGSKDN
VYSPYDSAIGISGGASHHVRTSSMAYGNGSRARAPPPPVDYEDEEEDRGHWGSKAEFLLS
CIGFSVGIGNVWRFPYLAYSNGGGAFLLPYVILLIFVGKPLYYMETAMGQFSRTSSLHVW
RCAPIMQGVGYAMIVLSLIVAIYYNVIMAYSIIYIGASFTGIANELPWTYCGEWWGADEN
CVVVSNVTDKSFVGLARCRPTLGITENCTKFQTSSEQFWEKYVLNITDGLGEFGDLGGFK
YDLPLALLLSWIVVFLCLMKGVKSSGKVVYFTATFPYLILIALLVQGCLLPGAAEGLAYL
FIPDFSKLLTVNPWIKAAEQMFFSLGISWGGLMMFGSYNKFHNRIDYDAAFVSVVDFCTS
LIASVVIFSVLGFLAKELDVPVADVAKGGQGLAFVVYPEALARLPLPWLWAVLFFFMLFL
LGLDSEFALLETVLTILYDGVPFFRRNKVKTTFVACSCCFLLGLPCVSFSGQFVLDIMDT
YGAGFAVLWTAFWEVAGLMWVYGVMNVCKDFKLMLGSEPGWYWKICWAVISPIFLVVIFL
TGIFTWEEHKYSDVVPYPSWASSIGWFLVALSAIQIPLWAIITTIHYAIKGKLSQVIKPT
SAWGPGDKAVRRAILDEQSGIARTGKYTYDNDAMTYNYHM
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtctagttactattctcaccatcaaggcggaggaggtggcgggagcaatcgtggcccg
cactacagtgccaacagctatcctagttaccccaactacgggtataccacggacagtcac
cacgaaatgagtgaatacaacggaaaaggcacctacagctcccggggctccaaagacaat
gtatattcaccttacgacagtgctattggaatctcaggcggagcctcacatcacgtgagg
acatcctccatggcctacggcaacgggagccgtgccagggcccccccacctcccgtcgat
tacgaggatgaagaggaggatcgaggacattggggctcaaaggccgaatttctactctcc
tgcatcggcttctcggttggaattggcaatgtctggagatttccgtacctggcctactcg
aatggaggcggtgccttcctcctgccttatgtgattcttttgatcttcgtgggcaagccc
ctgtactacatggagaccgccatggggcaattctcgcgcaccagttcactccacgtgtgg
cgatgtgcacccatcatgcaaggggtgggttatgccatgatcgtgttgtcgctcatcgtg
gccatctactacaatgtcatcatggcctattctatcatctacatcggagcttccttcacg
ggcatcgccaatgagctaccttggacatattgcggtgaatggtggggcgcagatgagaat
tgtgtggtggtgtccaatgtaacggacaagtcttttgtaggccttgcgcgatgtcgacca
actctgggtatcaccgagaactgtaccaaatttcaaacctccagcgaacaattctgggag
aaatatgtcttgaatatcaccgatggcttgggcgaatttggcgatttgggcggattcaaa
tacgatctccctctggcattgcttctgtcctggatcgtggtattcttatgtttgatgaaa
ggcgtcaaatcgagcggaaaggtggtttatttcaccgccacattcccgtacctcatcctc
atcgctctattggtccaaggatgcctccttcccggagcagctgagggtttggcctacttg
ttcatccctgattttagcaagctcctcactgtgaacccttggatcaaagcggcggagcag
atgttcttctccctgggcatctcttggggcggcctcatgatgtttgggtcctacaataag
ttccacaaccggatcgattacgacgcggcctttgtgtccgttgtggatttttgcacctcg
ctcattgcttccgtggtgatcttttccgttctcggcttcttggccaaggagctggatgtt
ccggttgcagatgtggctaaaggtggacaaggcctggcttttgtagtgtatccggaggct
ttggctcgattacctttaccgtggctgtgggcggtcttgttctttttcatgctgtttctc
ttgggattggactctgagtttgcacttctggaaactgttttaaccatcctctacgacggg
gttccattctttcgacggaacaaggtcaaaaccaccttcgtcgcctgttcatgttgcttc
cttcttggattgccatgtgtgagcttcagtggtcaattcgtcctcgacatcatggacaca
tatggagccggattcgctgtgctatggaccgccttttgggaggtggctggcttgatgtgg
gtctacggggtcatgaatgtctgcaaggacttcaagttgatgctgggaagcgagcctggg
tggtactggaaaatctgttgggctgtcatcagtcccatcttcttggtggtcattttcctc
accgggatctttacttgggaagaacacaagtacagcgacgtggttccctacccttcttgg
gcgtccagcattggttggttcttggtggcgctctcggccattcaaatccctctttgggct
atcatcacgactattcattacgccatcaaaggcaagttgagccaagtgatcaagcccact
tccgcctggggacccggtgacaaggccgttcgaagggccatcctggacgagcaaagtggg
atcgctcggacgggtaaatacacctacgataacgacgcaatgacgtacaattaccatatg
tag
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