Tigriopus californicus (tidepool copepod): 131890205
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Entry
131890205 CDS
T09700
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K homolog
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131890205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131890205
Spliceosome [BR:
tcf03041
]
Common components
Common spliceosomal components
hnRNP proteins
131890205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
MOEP19
Motif
Other DBs
NCBI-GeneID:
131890205
NCBI-ProteinID:
XP_059095494
LinkDB
All DBs
Position
11:complement(5014926..5017269)
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AA seq
447 aa
AA seq
DB search
MKRGSYEGAPPAPGGGPMKRPRGDKFEVRVLVPSKVAGSLIGKGGCNIQKLRTENNANVR
IPDCPGPERVMAIVVDQPEHAVQVIEKSLPYMTEEAVRGGPGAAAAPDGPLELRLLIHQS
VVGGIIGRAGFKIKEIREATGANLKVYQNCAPQSSDRCVAVSGTMDKLVGALAEVFKIVS
GTEIKGSDSPYDPINFDAFFSNDYGGYGTEADVFAAGGSVGGPPPFGGSRGTGGGRGGRG
SARGGDPGGFRGGRGGYQGGQSGSYGGGGGRGGYGSGFGGGGRGGGAGGGGYGGGARGGY
NDGYYGSSGSRDGYDGGAGFARGHQEVFDGGFGGRGGSGGQPFAAYGNGMSGVDNGPQES
TQVTIPKDMAGAIIGPGGSRIRKIRADSKAVIEIDEPAPGSNERIITIKGTKEQIQTAQY
FLQQSVRENASAPHPMPSGYGGSMPRY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtggcagctatgagggcgccccgcccgcccccgggggtggccccatgaagcga
ccccggggcgataaatttgaggtccgggtcctggtgcccagtaaggtggccggtagtctc
attggtaagggtgggtgtaacatccagaagttgcgcacggaaaacaatgccaacgtgcgc
atccccgactgtccgggacccgagcgggtcatggccattgtggtcgatcaacccgagcac
gctgtacaagttattgaaaagagtttgccctatatgacggaggaagctgttcgcggcggg
cctggtgcggccgccgcccccgatggccccttggaactccgcctcttgattcatcagtcc
gttgtgggcggtatcatcggtcgagctggtttcaaaatcaaggagattcgtgaggccacc
ggggccaacttgaaggtgtatcagaattgcgcgccccagagctccgaccgctgcgtggcc
gtctcgggcaccatggacaaactagtgggagccttggccgaggtgttcaagatcgtctca
ggcaccgaaatcaaaggctccgattcgccctatgatcctatcaacttcgacgccttcttt
tcgaatgactatggcggttacggcacagaggccgatgtctttgccgccggtggctccgtc
ggcggtcctccaccctttggtggtagtcgcggcactggcggcggccgtgggggtcgcggt
agtgcccgtggcggtgatcccggtggtttccggggtggacgcggtggttatcaaggtggc
caaagtggaagctatggtggcggcggaggtcgcggtggttatggcagcggctttggtggc
gggggccgaggtggcggagctggcggcggaggctacggcggtggagcacgtggtggctac
aacgatggctactacggttccagcggtagccgagacggttatgatggcggtgccggtttt
gctcgcggtcatcaagaggtctttgatggaggatttggcgggcgcggaggatcgggaggc
cagccttttgccgcgtatggtaacggcatgagcggcgtggacaacggacctcaagaatcg
actcaagtcaccatccccaaggatatggcgggtgccattatcggtccgggtggatcccgc
atccgcaagatccgtgcggactccaaagcggtcatcgagattgacgaacccgctcccgga
tcaaacgagcgcatcatcaccatcaagggaaccaaggaacaaatacaaaccgcccaatac
ttcttgcaacaaagtgtccgagagaacgccagtgcacctcaccccatgccctcgggttat
gggggcagcatgcctcgctactag
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