Tigriopus californicus (tidepool copepod): 131890216
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Entry
131890216 CDS
T09700
Name
(RefSeq) glycine receptor subunit alpha-2-like
KO
K05195
glycine receptor alpha-3
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04080
Neuroactive ligand-receptor interaction
tcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
131890216
04082 Neuroactive ligand signaling
131890216
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131890216
Ion channels [BR:
tcf04040
]
Ligand-gated channels
Glycine
131890216
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
131890216
NCBI-ProteinID:
XP_059095504
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Position
11:complement(13795726..13798226)
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AA seq
521 aa
AA seq
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MISIRPFGLGLWSLLAVSMRLLLRINTVLILMRLVQAQLFEDPWDQLDQCSCSNEDADVP
VGFLSLVGGALKVPRDYNKNVQPPGKPTIVDIGFIVNDVLEIDDDAYSVTLKMEMPMYWN
DSRIQFNTTLLDQVSPNRWLYIDPNWKDDLWFPSLVVQNMQEFKTITSIKSNEKLMITEI
PDKRFHYVAMHLIKFTCGLKFDFFPFDIHLCSMKVHLDSPVEELSLDFFHGSHLKWGWAN
TTTILDYGIDFEPLSIEALLETNTMFNGITYQKSISGFVVKLSRKVSVYLFNYFIPSGLF
VVVSWVSLIIPPDAVPGRVALIITTFLVLVNIANTVFSSSPTADTINPIQVWILACIVFV
FMTVLEYAYILFMMRRVKRHILMANNLKKNKPRKSSKVYTTEETPKISTLSSARTHSLTS
PIPEHDYVDCGTVKEFLTDGAKNNRMSNIRRRLEVIRNRFLDWRSKVRSALSPILDDLLD
NFQPDDTNLQLLMANTDFVFFWIMIMSFMIFNIIYWTYYTL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgataagcataaggccatttggcctcgggctttggtcgttactagccgtttcaatgagg
ctccttttgaggataaacacagtcttaatattgatgagacttgtccaagctcaattgttt
gaagatccttgggaccaattggaccaatgctcatgctcaaatgaagatgctgatgttcct
gtggggtttctatccctagtcggtggagccctaaaggttccaagggactacaacaagaat
gtgcaacctccagggaagccaactattgtcgatattggctttatcgtcaatgacgtccta
gaaattgacgatgatgcttattccgtcacattaaagatggaaatgcccatgtattggaac
gactcgcgtattcaattcaataccactttgttggatcaggtctcccccaaccgatggctc
tacattgacccgaattggaaggatgatctttggttcccatcgttagtggttcaaaatatg
caggagttcaaaacaattacatccatcaaatccaacgagaaactcatgatcaccgaaatc
cctgacaaaagatttcactacgtagcgatgcacctgatcaagttcacttgcggtttgaaa
ttcgactttttcccatttgacattcatctttgctctatgaaggttcatttggatagtcca
gttgaagaacttagtttggatttctttcatggttctcacttgaaatggggttgggccaat
acaacgactattttggattatgggatcgactttgaacctttatcgatagaagcgcttctg
gaaaccaacactatgttcaatggcattacttatcagaaatccatttctggtttcgtcgtc
aagctctctcgcaaagtcagcgtctacctattcaactacttcattccctctggtttgttc
gtggtagtcagttgggttagcttgatcattccccccgatgctgttccaggaagagttgct
ttaatcataacgaccttccttgtcttggtaaatatcgctaacactgttttctcgagctcg
ccgacggcagacaccataaatcccattcaggtctggattttggcatgcattgtatttgtt
ttcatgactgtgttggaatacgcgtacattctcttcatgatgagacgagtcaagaggcac
attctcatggccaataacttgaaaaagaacaaacccaggaagtcatccaaagtctacaca
acagaagagactcccaagatttccaccctgagttcggctcggactcattcgttgaccagc
cctattcctgagcacgattatgttgattgtggaacggtcaaagagtttctcacggatggt
gcaaagaacaatcgcatgagcaacatcagaaggagattggaggtgatcagaaacagattc
ttggattggagatcgaaagtcaggtctgcgttaagcccaatactcgatgatctgttggat
aactttcaaccggatgatacgaatctgcaattgcttatggctaatacggactttgtcttc
ttctggattatgatcatgtcctttatgatatttaatatcatatattggacttactatacc
ttgtag
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