Tigriopus californicus (tidepool copepod): 131890309
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Entry
131890309 CDS
T09700
Name
(RefSeq) prominin-like protein
KO
K06532
prominin 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131890309
04090 CD molecules [BR:
tcf04090
]
131890309
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
131890309
CD molecules [BR:
tcf04090
]
Proteins
131890309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
DUF2207_C
PKD_5
TMP_3
ApoLp-III
ATG17_like
Sec10_N
DUF7637
Potyvirid-P3
Motif
Other DBs
NCBI-GeneID:
131890309
NCBI-ProteinID:
XP_059095615
LinkDB
All DBs
Position
11:complement(2241683..2245386)
Genome browser
AA seq
945 aa
AA seq
DB search
MSINYTLPEPPNDYESVTEPSANVLTSTAYLFTDIFLNGLFKTPVIPIEGLNTIDIENFD
PFVDYLAEHWQDVLKQDWRLLTTLSLGVLLILALPISAIVYCCVKCCCSKVGQAPKKGDR
TLILSLGSVTGLGLILCWLAFAWTCGAKVEFDHHIHKGLIESINVGANDAQLYLNNLACE
VSHLAKTDFGLLSEALENQIDQIGGEFSSLLNDTVDEIKFKEIQTNAKEITDFVTNSNGN
LNITVEKLTSCSINAEKIAKQVTNFKEEEDHSLFENEDFCKIVGESPCEKFRKAKEDINC
ELATFENIIQAAKDILIGATLEEDVVVGIGKIPVELEKALDEILGFQQTFDSNYASIFKE
QIDEIQQYAAEVSESIQNFTQDIQLDEITSNLTGVVNDTITDYYGYVSYAGLLTPLILIG
IILAVLTLGLICGCAGKSGTTLSRTGGISMFSATMVTLVLGWIIWLLVTVFYLVGALTQE
VGCTTLEDPVHSPYYTETQIPRFLDKMYQELLNTTESFDLNATLTGFKNGDSLYHALEVE
QFFDLDEFDNWQESFNISEILDDVKVQIDEGVIGIVNAMNASLDEEQLTQLTNTLKPIVS
GLNDAIDVIDTSVLINQTALQSLNDLLESMKTKLEESPNSEEFLSALKPIQNSVQAIVNS
TDDLTRILDEAKNKAKDIIAAVTKIIGSDNLRANDENSLLDQIKTLLEQAITEVNDVTRN
DILAIFDNQSKTLITTVDGFIQFSKNYSINDFGKTGPVYNIYRGVIVSLCDSTVNPFNAY
WSGMGVILILLVPVMIISCILEPVLRRRGTRQFQDVRTTHPKHLQVNSGTYPNEQGYANP
NSIMPHESRSRPSNMDNRNHPSQHIYEDLRPPSGKTGVTKYRPEDYFPGYAGKGRKNPLE
SAQIRRPTQAFHPEYRRSPSTPKGIGPDGRFIYEIPSVYRRRTSF
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattaactatacccttccggaacctccaaacgattatgagtctgtgacggaacct
tctgccaacgtattgaccagcactgcttatctattcaccgacatctttctcaacggacta
ttcaagactcctgtgataccaatcgaaggcctaaacacgatagacatcgaaaacttcgac
ccattcgtggattatctagccgagcactggcaggatgtacttaaacaagattggcgtctt
ctaacaaccctttcgttgggagttcttttgatcttggctcttccaatttccgcaatcgtc
tattgctgcgtcaagtgttgctgttccaaagttggccaagcacccaagaaaggggatcgc
acgttgatccttagccttggatctgtcacggggctaggtctaatcttgtgctggttggcc
tttgcttggacttgtggtgccaaagtggagtttgaccatcacattcacaaagggctgatc
gaaagcatcaacgtaggagccaacgatgctcagctttacttgaacaacctagcatgtgag
gtgtcccatctagccaagacggattttggccttttgagtgaggccttggagaatcaaatc
gaccaaatcggtggggaatttagtagtcttctaaatgatacggtggatgagattaaattt
aaggagatacaaactaacgccaaagaaataacggactttgtcactaattcaaatggcaat
ttaaacattacagttgaaaaattgacctcttgttcaataaatgcagagaaaattgccaag
caggtaaccaatttcaaagaagaagaagaccattcgctttttgaaaatgaagacttttgt
aagatagttggcgagtcaccttgcgaaaagttccgtaaagctaaggaagacattaattgt
gagctcgcaacgtttgaaaatattattcaggcggcaaaggatatcctcattggtgcaaca
ttagaggaagatgtcgttgtcgggattggcaaaattccagtcgagttggaaaaagctttg
gacgagattctaggcttccagcaaacatttgactccaactatgccagcatattcaaagaa
caaatcgacgagatccaacaatatgccgcagaggtctcggaatccatccaaaacttcacc
caagacattcaactcgacgagattaccagcaacttaacaggtgttgttaatgacaccatc
acggattactacggttatgtcagctatgctggcttactcacgcctttgattctgatcggg
atcatcttggcggttcttaccttgggcttaatctgtggatgtgccggaaaatctggcacc
accctgagcagaactggcgggatctcaatgttttcggccacgatggtcactctcgtatta
ggttggataatctggttgttggtgaccgtgttctatcttgtgggcgccttgactcaggag
gttggctgtacaaccctggaagatcccgttcattctccctactacacagagacccaaatc
cctcgattcctggacaagatgtatcaagaactcctcaacaccaccgagtccttcgatctg
aatgccactttgaccggctttaagaatggtgattcactctaccatgcccttgaggttgag
caattctttgatctggatgagtttgacaattggcaggagtcatttaacatcagtgaaatc
ttggacgatgtcaaggtccagatcgatgaaggagtgattggtattgtcaatgccatgaat
gcaagtctcgacgaggaacagctaacacaactgacgaatacattgaaacccattgtgagt
ggattgaatgatgccatagatgttattgatacgagtgttctcatcaaccagacagcactt
cagagtttaaacgacttattggagagtatgaaaacaaaattagaagaatccccaaattcg
gaggaatttctttctgctttgaagccgattcagaactcagtgcaagctattgtgaacagc
actgatgacctgacacggattctggatgaagccaagaacaaggccaaggacatcattgcg
gcagtaaccaaaatcattggcagtgataatttaagggccaatgatgaaaatagtctcctc
gaccagatcaaaacccttctggaacaagccataacggaagtaaacgatgtgacgcggaat
gacatccttgctatattcgacaaccaaagcaaaactctcatcaccacggtggatgggttt
atccaattcagcaaaaattactccatcaacgacttcggcaaaactggacctgtctacaat
atttaccgtggcgtcattgtatctttgtgtgactcaacagtgaatccgttcaatgcatat
tggtccggaatgggtgtgatcttgatcctgctggtccctgtcatgattatcagttgtatt
ttggaacccgtattgagacggagagggactcgtcaattccaagacgttcgcacaacacat
ccgaagcacttacaagtcaactcgggaacttatccgaatgaacaaggatacgcaaaccct
aattccatcatgccccatgagagtcgctcccggccctcaaatatggacaaccgaaaccat
ccaagtcagcatatttatgaagacctaagacccccaagtggcaaaacgggcgtgactaaa
tatcgaccggaggattactttcctggatatgcaggaaagggtcgaaagaatccactagaa
agcgctcaaatccgtcggccgactcaagccttccaccctgaatatcgccgatcaccgtca
acgcccaaagggattggcccggatggtcgattcatttatgaaataccatcggtttataga
cgacgaacttctttctga
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